Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 AC087289.5-201ENST00000586076 3175 ntBASIC17.7■□□□□ 0.42
NKX6-2Q9C056 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-2Q9C056 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX6-2Q9C056 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-2Q9C056 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NKX6-2Q9C056 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 AC025884.2-201ENST00000553429 711 ntBASIC17.65■□□□□ 0.42
NKX6-2Q9C056 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX6-2Q9C056 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.64■□□□□ 0.42
NKX6-2Q9C056 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms