Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 AC110285.6-201ENST00000617652 491 ntBASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNPPD1Q9BV87 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 AL499627.2-201ENST00000606283 725 ntBASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNPPD1Q9BV87 AC133637.1-201ENST00000624115 1537 ntBASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 AC004687.1-201ENST00000579003 1625 ntBASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 AL138724.1-201ENST00000606771 1088 ntBASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNPPD1Q9BV87 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 PBX2P1-201ENST00000493219 1291 ntBASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 AC024257.2-201ENST00000549699 147 ntBASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 AC135279.3-201ENST00000610945 1311 ntBASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNPPD1Q9BV87 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 AC011298.3-201ENST00000615796 283 ntBASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNPPD1Q9BV87 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 PKD1P6-201ENST00000343738 4769 ntBASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNPPD1Q9BV87 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CNPPD1Q9BV87 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNPPD1Q9BV87 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.64■□□□□ 0.9
CNPPD1Q9BV87 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNPPD1Q9BV87 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms