Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56Q96MV1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56Q96MV1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56Q96MV1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TMEM56Q96MV1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18■□□□□ 0.47
TMEM56Q96MV1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM56Q96MV1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18■□□□□ 0.47
TMEM56Q96MV1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18■□□□□ 0.47
TMEM56Q96MV1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56Q96MV1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56Q96MV1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM56Q96MV1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 AC010980.1-201ENST00000587192 1142 ntBASIC17.99■□□□□ 0.47
TMEM56Q96MV1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM56Q96MV1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM56Q96MV1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 LINC01529-204ENST00000636474 1715 ntBASIC17.97■□□□□ 0.47
TMEM56Q96MV1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM56Q96MV1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 PVT1_1.1-201ENST00000615125 194 ntBASIC17.96■□□□□ 0.47
TMEM56Q96MV1 AC012354.3-201ENST00000623734 483 ntBASIC17.96■□□□□ 0.47
TMEM56Q96MV1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM56Q96MV1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TMEM56Q96MV1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 LINC01960-201ENST00000563759 1884 ntBASIC17.95■□□□□ 0.46
TMEM56Q96MV1 FP325331.1-202ENST00000623531 1380 ntBASIC17.95■□□□□ 0.46
TMEM56Q96MV1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 MIR4508-201ENST00000584178 70 ntBASIC17.95■□□□□ 0.46
TMEM56Q96MV1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM56Q96MV1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM56Q96MV1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TMEM56Q96MV1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM56Q96MV1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM56Q96MV1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMEM56Q96MV1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM56Q96MV1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms