Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 SYT6-210ENST00000641643 1587 ntBASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.58■□□□□ 0.89
SIMC1Q8NDZ2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIMC1Q8NDZ2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIMC1Q8NDZ2 AC087742.1-201ENST00000575880 1738 ntBASIC20.58■□□□□ 0.88
SIMC1Q8NDZ2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.58■□□□□ 0.88
SIMC1Q8NDZ2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIMC1Q8NDZ2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SIMC1Q8NDZ2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.57■□□□□ 0.88
SIMC1Q8NDZ2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 UNC93B3-201ENST00000308076 687 ntBASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIMC1Q8NDZ2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 AC096631.2-201ENST00000436136 790 ntBASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SIMC1Q8NDZ2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 AC092171.4-201ENST00000609130 632 ntBASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIMC1Q8NDZ2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 SLC25A24-204ENST00000569674 2357 ntBASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 AL117328.2-201ENST00000624617 1940 ntBASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 AC010525.1-201ENST00000585559 441 ntBASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SIMC1Q8NDZ2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms