Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 CA15P2-201ENST00000611168 834 ntBASIC16.32■□□□□ 0.2
CMC4P56277 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.32■□□□□ 0.2
CMC4P56277 AL031602.1-201ENST00000633169 911 ntBASIC16.32■□□□□ 0.2
CMC4P56277 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CMC4P56277 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.31■□□□□ 0.2
CMC4P56277 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMC4P56277 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMC4P56277 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMC4P56277 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.31■□□□□ 0.2
CMC4P56277 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.31■□□□□ 0.2
CMC4P56277 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CMC4P56277 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CMC4P56277 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.31■□□□□ 0.2
CMC4P56277 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.3■□□□□ 0.2
CMC4P56277 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.3■□□□□ 0.2
CMC4P56277 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.3■□□□□ 0.2
CMC4P56277 IGHV3-19-201ENST00000521488 291 ntBASIC16.3■□□□□ 0.2
CMC4P56277 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.3■□□□□ 0.2
CMC4P56277 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.3■□□□□ 0.2
CMC4P56277 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CMC4P56277 AL031432.3-201ENST00000607698 485 ntBASIC16.3■□□□□ 0.2
CMC4P56277 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.3■□□□□ 0.2
CMC4P56277 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.3■□□□□ 0.2
CMC4P56277 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMC4P56277 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMC4P56277 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CMC4P56277 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.29■□□□□ 0.2
CMC4P56277 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.29■□□□□ 0.2
CMC4P56277 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CMC4P56277 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMC4P56277 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.28■□□□□ 0.2
CMC4P56277 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.28■□□□□ 0.2
CMC4P56277 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.28■□□□□ 0.2
CMC4P56277 AC010525.1-201ENST00000585559 441 ntBASIC16.28■□□□□ 0.2
CMC4P56277 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CMC4P56277 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.28■□□□□ 0.2
CMC4P56277 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMC4P56277 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CMC4P56277 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CMC4P56277 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMC4P56277 LINC01960-201ENST00000563759 1884 ntBASIC16.27■□□□□ 0.2
CMC4P56277 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CMC4P56277 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.27■□□□□ 0.2
CMC4P56277 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CMC4P56277 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMC4P56277 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.27■□□□□ 0.2
CMC4P56277 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.27■□□□□ 0.2
CMC4P56277 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
CMC4P56277 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.27■□□□□ 0.2
CMC4P56277 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.27■□□□□ 0.2
CMC4P56277 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.27■□□□□ 0.2
CMC4P56277 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CMC4P56277 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.27■□□□□ 0.2
CMC4P56277 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMC4P56277 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CMC4P56277 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CMC4P56277 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CMC4P56277 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CMC4P56277 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CMC4P56277 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CMC4P56277 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CMC4P56277 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 OXCT2P1-201ENST00000447263 1535 ntBASIC16.26■□□□□ 0.19
CMC4P56277 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CMC4P56277 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CMC4P56277 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.26■□□□□ 0.19
CMC4P56277 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.26■□□□□ 0.19
CMC4P56277 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.26■□□□□ 0.19
CMC4P56277 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CMC4P56277 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms