Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	IRC6	YFR043C	714 nt		4.41	□□□□□ -1.7
RPC53	P25441	PRE9	YGR135W	777 nt		4.41	□□□□□ -1.7
RPC53	P25441	SAY1	YGR263C	1275 nt		4.41	□□□□□ -1.7
RPC53	P25441	YHR112C	YHR112C	1137 nt		4.41	□□□□□ -1.7
RPC53	P25441	HIS6	YIL020C	786 nt		4.41	□□□□□ -1.7
RPC53	P25441	FMC1	YIL098C	468 nt		4.41	□□□□□ -1.7
RPC53	P25441	ISA1	YLL027W	753 nt		4.41	□□□□□ -1.7
RPC53	P25441	REX3	YLR107W	1215 nt		4.41	□□□□□ -1.7
RPC53	P25441	RPS19A	YOL121C	435 nt		4.41	□□□□□ -1.7
RPC53	P25441	SEN1	YLR430W	6696 nt		4.41	□□□□□ -1.7
RPC53	P25441	BUD6	YLR319C	2367 nt		4.41	□□□□□ -1.7
RPC53	P25441	ROK1	YGL171W	1695 nt		4.41	□□□□□ -1.7
RPC53	P25441	YOL153C	YOL153C	1746 nt		4.41	□□□□□ -1.7
RPC53	P25441	SMP3	YOR149C	1551 nt		4.4	□□□□□ -1.7
RPC53	P25441	NBP2	YDR162C	711 nt		4.4	□□□□□ -1.71
RPC53	P25441	IRC22	YEL001C	678 nt		4.4	□□□□□ -1.71
RPC53	P25441	YGL132W	YGL132W	336 nt		4.4	□□□□□ -1.71
RPC53	P25441	SDT1	YGL224C	843 nt		4.4	□□□□□ -1.71
RPC53	P25441	YGR219W	YGR219W	342 nt		4.4	□□□□□ -1.71
RPC53	P25441	BNA1	YJR025C	534 nt		4.4	□□□□□ -1.71
RPC53	P25441	YMR084W	YMR084W	789 nt		4.4	□□□□□ -1.71
RPC53	P25441	MED7	YOL135C	669 nt		4.4	□□□□□ -1.71
RPC53	P25441	IDI1	YPL117C	867 nt		4.4	□□□□□ -1.71
RPC53	P25441	YPK9	YOR291W	4419 nt		4.4	□□□□□ -1.71
RPC53	P25441	CTR86	YCR054C	1692 nt		4.4	□□□□□ -1.71
RPC53	P25441	SEC2	YNL272C	2280 nt		4.4	□□□□□ -1.71
RPC53	P25441	HCM1	YCR065W	1695 nt		4.39	□□□□□ -1.71
RPC53	P25441	NUP133	YKR082W	3474 nt		4.39	□□□□□ -1.71
RPC53	P25441	PMS1	YNL082W	2622 nt		4.39	□□□□□ -1.71
RPC53	P25441	PEX21	YGR239C	867 nt		4.39	□□□□□ -1.71
RPC53	P25441	RNA14	YMR061W	2034 nt		4.39	□□□□□ -1.71
RPC53	P25441	RPP1A	YDL081C	321 nt		4.38	□□□□□ -1.71
RPC53	P25441	DIN7	YDR263C	1293 nt		4.38	□□□□□ -1.71
RPC53	P25441	SPO73	YER046W	432 nt		4.38	□□□□□ -1.71
RPC53	P25441	SPI1	YER150W	447 nt		4.38	□□□□□ -1.71
RPC53	P25441	RPL8A	YHL033C	771 nt		4.38	□□□□□ -1.71
RPC53	P25441	YHR032C-A	YHR032C-A	120 nt		4.38	□□□□□ -1.71
RPC53	P25441	HTA2	YBL003C	399 nt		4.38	□□□□□ -1.71
RPC53	P25441	YMR114C	YMR114C	1107 nt		4.38	□□□□□ -1.71
RPC53	P25441	SPS4	YOR313C	1017 nt		4.38	□□□□□ -1.71
RPC53	P25441	RET3	YPL010W	570 nt		4.38	□□□□□ -1.71
RPC53	P25441	SLX1	YBR228W	915 nt		4.38	□□□□□ -1.71
RPC53	P25441	TDA3	YHR009C	1572 nt		4.38	□□□□□ -1.71
RPC53	P25441	ARO9	YHR137W	1542 nt		4.37	□□□□□ -1.71
RPC53	P25441	CHL1	YPL008W	2586 nt		4.37	□□□□□ -1.71
RPC53	P25441	NUG1	YER006W	1563 nt		4.37	□□□□□ -1.71
RPC53	P25441	HSP30	YCR021C	999 nt		4.37	□□□□□ -1.71
RPC53	P25441	MSS2	YDL107W	1056 nt		4.37	□□□□□ -1.71
RPC53	P25441	CLC1	YGR167W	702 nt		4.37	□□□□□ -1.71
RPC53	P25441	MAP1	YLR244C	1164 nt		4.37	□□□□□ -1.71
RPC53	P25441	YBR056W-A	YBR056W-A	201 nt		4.37	□□□□□ -1.71
RPC53	P25441	ARO80	YDR421W	2853 nt		4.37	□□□□□ -1.71
RPC53	P25441	NTA1	YJR062C	1374 nt		4.37	□□□□□ -1.71
RPC53	P25441	RAD54	YGL163C	2697 nt		4.37	□□□□□ -1.71
RPC53	P25441	ALO1	YML086C	1581 nt		4.36	□□□□□ -1.71
RPC53	P25441	BCK2	YER167W	2556 nt		4.36	□□□□□ -1.71
RPC53	P25441	YLR152C	YLR152C	1731 nt		4.36	□□□□□ -1.71
RPC53	P25441	COS8	YHL048W	1146 nt		4.36	□□□□□ -1.71
RPC53	P25441	YHR069C-A	YHR069C-A	363 nt		4.36	□□□□□ -1.71
RPC53	P25441	CDC12	YHR107C	1224 nt		4.36	□□□□□ -1.71
RPC53	P25441	WSS1	YHR134W	810 nt		4.36	□□□□□ -1.71
RPC53	P25441	ARC15	YIL062C	465 nt		4.36	□□□□□ -1.71
RPC53	P25441	RPL18B	YNL301C	561 nt		4.36	□□□□□ -1.71
RPC53	P25441	PWR1	PWR1	941 nt		4.36	□□□□□ -1.71
RPC53	P25441	MIS1	YBR084W	2928 nt		4.35	□□□□□ -1.71
RPC53	P25441	YSH1	YLR277C	2340 nt		4.35	□□□□□ -1.71
RPC53	P25441	AHA1	YDR214W	1053 nt		4.35	□□□□□ -1.71
RPC53	P25441	YML116W-A	YML116W-A	303 nt		4.35	□□□□□ -1.71
RPC53	P25441	MET16	YPR167C	786 nt		4.35	□□□□□ -1.71
RPC53	P25441	KIN4	YOR233W	2403 nt		4.35	□□□□□ -1.71
RPC53	P25441	GRX6	YDL010W	696 nt		4.34	□□□□□ -1.71
RPC53	P25441	NOP6	YDL213C	678 nt		4.34	□□□□□ -1.71
RPC53	P25441	YDR222W	YDR222W	1248 nt		4.34	□□□□□ -1.71
RPC53	P25441	BET1	YIL004C	429 nt		4.34	□□□□□ -1.71
RPC53	P25441	AAD10	YJR155W	867 nt		4.34	□□□□□ -1.71
RPC53	P25441	YBL059W	YBL059W	582 nt		4.34	□□□□□ -1.71
RPC53	P25441	TMA16	YOR252W	537 nt		4.34	□□□□□ -1.71
RPC53	P25441	BMT2	YBR141C	1014 nt		4.34	□□□□□ -1.71
RPC53	P25441	HMG1	YML075C	3165 nt		4.34	□□□□□ -1.72
RPC53	P25441	HOS3	YPL116W	2094 nt		4.33	□□□□□ -1.72
RPC53	P25441	YOL075C	YOL075C	3885 nt		4.33	□□□□□ -1.72
RPC53	P25441	COX4	YGL187C	468 nt		4.33	□□□□□ -1.72
RPC53	P25441	YHL045W	YHL045W	348 nt		4.33	□□□□□ -1.72
RPC53	P25441	PAM18	YLR008C	507 nt		4.33	□□□□□ -1.72
RPC53	P25441	BLS1	YLR408C	369 nt		4.33	□□□□□ -1.72
RPC53	P25441	RAD10	YML095C	633 nt		4.33	□□□□□ -1.72
RPC53	P25441	ASC1	YMR116C	960 nt		4.33	□□□□□ -1.72
RPC53	P25441	YPL077C	YPL077C	723 nt		4.33	□□□□□ -1.72
RPC53	P25441	POC4	YPL144W	447 nt		4.33	□□□□□ -1.72
RPC53	P25441	POS5	YPL188W	1245 nt		4.33	□□□□□ -1.72
RPC53	P25441	ACE2	YLR131C	2313 nt		4.33	□□□□□ -1.72
RPC53	P25441	TRS85	YDR108W	2097 nt		4.33	□□□□□ -1.72
RPC53	P25441	BUD5	YCR038C	1929 nt		4.33	□□□□□ -1.72
RPC53	P25441	YDR133C	YDR133C	336 nt		4.32	□□□□□ -1.72
RPC53	P25441	YDR161W	YDR161W	1164 nt		4.32	□□□□□ -1.72
RPC53	P25441	YKL162C-A	YKL162C-A	153 nt		4.32	□□□□□ -1.72
RPC53	P25441	HRT3	YLR097C	1035 nt		4.32	□□□□□ -1.72
RPC53	P25441	FSH3	YOR280C	801 nt		4.32	□□□□□ -1.72
RPC53	P25441	NHX1	YDR456W	1902 nt		4.32	□□□□□ -1.72
RPC53	P25441	SRP72	YPL210C	1923 nt		4.32	□□□□□ -1.72

Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms