Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LDB2O43679 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
LDB2O43679 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
LDB2O43679 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.96■■□□□ 1.11
LDB2O43679 CA15P2-201ENST00000611168 834 ntBASIC21.96■■□□□ 1.11
LDB2O43679 AC136469.2-201ENST00000623944 1028 ntBASIC21.96■■□□□ 1.11
LDB2O43679 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.96■■□□□ 1.11
LDB2O43679 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.96■■□□□ 1.11
LDB2O43679 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LDB2O43679 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 AC137767.1-201ENST00000602918 1920 ntBASIC21.96■■□□□ 1.11
LDB2O43679 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LDB2O43679 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
LDB2O43679 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB2O43679 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB2O43679 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LDB2O43679 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB2O43679 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LDB2O43679 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.95■■□□□ 1.1
LDB2O43679 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.95■■□□□ 1.1
LDB2O43679 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.95■■□□□ 1.1
LDB2O43679 AC079834.2-201ENST00000609776 1949 ntBASIC21.95■■□□□ 1.1
LDB2O43679 AC139530.1-201ENST00000575312 1977 ntBASIC21.95■■□□□ 1.1
LDB2O43679 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LDB2O43679 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB2O43679 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
LDB2O43679 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.94■■□□□ 1.1
LDB2O43679 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.94■■□□□ 1.1
LDB2O43679 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.94■■□□□ 1.1
LDB2O43679 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LDB2O43679 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.94■■□□□ 1.1
LDB2O43679 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.94■■□□□ 1.1
LDB2O43679 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
LDB2O43679 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LDB2O43679 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.94■■□□□ 1.1
LDB2O43679 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
LDB2O43679 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LDB2O43679 UNC93B3-201ENST00000308076 687 ntBASIC21.93■■□□□ 1.1
LDB2O43679 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.93■■□□□ 1.1
LDB2O43679 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB2O43679 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB2O43679 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LDB2O43679 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB2O43679 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB2O43679 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.93■■□□□ 1.1
LDB2O43679 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB2O43679 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LDB2O43679 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LDB2O43679 LINC00526-201ENST00000581067 1875 ntBASIC21.93■■□□□ 1.1
LDB2O43679 AC010525.1-201ENST00000585559 441 ntBASIC21.93■■□□□ 1.1
LDB2O43679 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.92■■□□□ 1.1
LDB2O43679 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.92■■□□□ 1.1
LDB2O43679 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.92■■□□□ 1.1
LDB2O43679 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB2O43679 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
LDB2O43679 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LDB2O43679 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.91■■□□□ 1.1
LDB2O43679 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LDB2O43679 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LDB2O43679 AC019069.1-201ENST00000610008 1333 ntBASIC21.91■■□□□ 1.1
LDB2O43679 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LDB2O43679 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LDB2O43679 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.91■■□□□ 1.1
LDB2O43679 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LDB2O43679 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LDB2O43679 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LDB2O43679 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LDB2O43679 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LDB2O43679 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.9■■□□□ 1.1
LDB2O43679 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LDB2O43679 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LDB2O43679 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LDB2O43679 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LDB2O43679 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.9■■□□□ 1.1
LDB2O43679 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.9■■□□□ 1.1
LDB2O43679 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.9■■□□□ 1.1
LDB2O43679 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.89■■□□□ 1.09
LDB2O43679 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms