Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.94□□□□□ -0.02
NDUFA1O15239 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.94□□□□□ -0.02
NDUFA1O15239 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.94□□□□□ -0.02
NDUFA1O15239 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NDUFA1O15239 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NDUFA1O15239 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NDUFA1O15239 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NDUFA1O15239 FAM99A-202ENST00000538190 1989 ntBASIC14.94□□□□□ -0.02
NDUFA1O15239 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NDUFA1O15239 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NDUFA1O15239 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NDUFA1O15239 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFA1O15239 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NDUFA1O15239 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
NDUFA1O15239 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFA1O15239 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NDUFA1O15239 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.93□□□□□ -0.02
NDUFA1O15239 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.93□□□□□ -0.02
NDUFA1O15239 AC120024.1-201ENST00000562672 995 ntBASIC14.93□□□□□ -0.02
NDUFA1O15239 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.93□□□□□ -0.02
NDUFA1O15239 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.93□□□□□ -0.02
NDUFA1O15239 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.93□□□□□ -0.02
NDUFA1O15239 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.93□□□□□ -0.02
NDUFA1O15239 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFA1O15239 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NDUFA1O15239 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
NDUFA1O15239 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NDUFA1O15239 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NDUFA1O15239 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.92□□□□□ -0.02
NDUFA1O15239 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NDUFA1O15239 AL121603.2-201ENST00000557373 2117 ntBASIC14.92□□□□□ -0.02
NDUFA1O15239 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA1O15239 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.92□□□□□ -0.02
NDUFA1O15239 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NDUFA1O15239 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFA1O15239 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NDUFA1O15239 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NDUFA1O15239 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 KRT18P24-201ENST00000344739 1156 ntBASIC14.91□□□□□ -0.02
NDUFA1O15239 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NDUFA1O15239 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFA1O15239 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NDUFA1O15239 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 AC073130.3-201ENST00000624389 2278 ntBASIC14.91□□□□□ -0.02
NDUFA1O15239 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NDUFA1O15239 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA1O15239 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.9□□□□□ -0.02
NDUFA1O15239 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 AC010542.4-201ENST00000563151 1910 ntBASIC14.9□□□□□ -0.02
NDUFA1O15239 AL353803.4-201ENST00000565882 1934 ntBASIC14.9□□□□□ -0.02
NDUFA1O15239 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 AC087742.1-201ENST00000575880 1738 ntBASIC14.9□□□□□ -0.02
NDUFA1O15239 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NDUFA1O15239 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.9□□□□□ -0.02
NDUFA1O15239 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 ATP5G2P3-201ENST00000429083 425 ntBASIC14.9□□□□□ -0.02
NDUFA1O15239 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.9□□□□□ -0.02
NDUFA1O15239 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms