Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.38■■□□□ 1.33
RCCD1A6NED2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RCCD1A6NED2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RCCD1A6NED2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.38■■□□□ 1.33
RCCD1A6NED2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
RCCD1A6NED2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RCCD1A6NED2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
RCCD1A6NED2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RCCD1A6NED2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.37■■□□□ 1.33
RCCD1A6NED2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RCCD1A6NED2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.37■■□□□ 1.33
RCCD1A6NED2 AC005229.4-201ENST00000610085 2198 ntBASIC23.37■■□□□ 1.33
RCCD1A6NED2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RCCD1A6NED2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RCCD1A6NED2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
RCCD1A6NED2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
RCCD1A6NED2 AC021242.3-201ENST00000607598 1377 ntBASIC23.37■■□□□ 1.33
RCCD1A6NED2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RCCD1A6NED2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RCCD1A6NED2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RCCD1A6NED2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RCCD1A6NED2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
RCCD1A6NED2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RCCD1A6NED2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.36■■□□□ 1.33
RCCD1A6NED2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.36■■□□□ 1.33
RCCD1A6NED2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RCCD1A6NED2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.36■■□□□ 1.33
RCCD1A6NED2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.36■■□□□ 1.33
RCCD1A6NED2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RCCD1A6NED2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RCCD1A6NED2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RCCD1A6NED2 AC004687.1-201ENST00000579003 1625 ntBASIC23.35■■□□□ 1.33
RCCD1A6NED2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RCCD1A6NED2 YBX1P4-201ENST00000392794 808 ntBASIC23.35■■□□□ 1.33
RCCD1A6NED2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RCCD1A6NED2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RCCD1A6NED2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.35■■□□□ 1.33
RCCD1A6NED2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RCCD1A6NED2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.34■■□□□ 1.33
RCCD1A6NED2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 AL031848.2-201ENST00000607670 837 ntBASIC23.34■■□□□ 1.33
RCCD1A6NED2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
RCCD1A6NED2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RCCD1A6NED2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RCCD1A6NED2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RCCD1A6NED2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.33■■□□□ 1.33
RCCD1A6NED2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RCCD1A6NED2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.33■■□□□ 1.33
RCCD1A6NED2 AC009086.3-201ENST00000623486 1008 ntBASIC23.33■■□□□ 1.33
RCCD1A6NED2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RCCD1A6NED2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.33■■□□□ 1.32
RCCD1A6NED2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
RCCD1A6NED2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.33■■□□□ 1.32
RCCD1A6NED2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RCCD1A6NED2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RCCD1A6NED2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RCCD1A6NED2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RCCD1A6NED2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RCCD1A6NED2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RCCD1A6NED2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RCCD1A6NED2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.31■■□□□ 1.32
RCCD1A6NED2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.31■■□□□ 1.32
RCCD1A6NED2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.31■■□□□ 1.32
RCCD1A6NED2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.31■■□□□ 1.32
RCCD1A6NED2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.31■■□□□ 1.32
RCCD1A6NED2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RCCD1A6NED2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RCCD1A6NED2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.31■■□□□ 1.32
RCCD1A6NED2 AC009102.2-201ENST00000606772 1639 ntBASIC23.31■■□□□ 1.32
RCCD1A6NED2 CA15P2-201ENST00000611168 834 ntBASIC23.31■■□□□ 1.32
RCCD1A6NED2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
RCCD1A6NED2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.31■■□□□ 1.32
RCCD1A6NED2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RCCD1A6NED2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RCCD1A6NED2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RCCD1A6NED2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms