Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHA13Q9Y5I0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 DUX4L4-201ENST00000566884 1269 ntBASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHA13Q9Y5I0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHA13Q9Y5I0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 AL031848.2-201ENST00000607670 837 ntBASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 AC009086.3-201ENST00000623486 1008 ntBASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 AC010542.4-201ENST00000563151 1910 ntBASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PCDHA13Q9Y5I0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 AC021242.3-201ENST00000607598 1377 ntBASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 AC026310.3-201ENST00000625186 2373 ntBASIC23.46■■□□□ 1.35
PCDHA13Q9Y5I0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHA13Q9Y5I0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHA13Q9Y5I0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 FAM99A-202ENST00000538190 1989 ntBASIC23.45■■□□□ 1.34
PCDHA13Q9Y5I0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHA13Q9Y5I0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHA13Q9Y5I0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHA13Q9Y5I0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHA13Q9Y5I0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHA13Q9Y5I0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.43■■□□□ 1.34
PCDHA13Q9Y5I0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHA13Q9Y5I0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA13Q9Y5I0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms