Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF6Q9Y252 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF6Q9Y252 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF6Q9Y252 AC142381.2-201ENST00000566120 298 ntBASIC20.58■□□□□ 0.89
RNF6Q9Y252 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF6Q9Y252 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF6Q9Y252 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF6Q9Y252 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF6Q9Y252 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF6Q9Y252 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
RNF6Q9Y252 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF6Q9Y252 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF6Q9Y252 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF6Q9Y252 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF6Q9Y252 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF6Q9Y252 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF6Q9Y252 SRD5A1P1-201ENST00000442297 786 ntBASIC20.56■□□□□ 0.88
RNF6Q9Y252 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF6Q9Y252 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RNF6Q9Y252 AL136162.1-201ENST00000607711 1078 ntBASIC20.56■□□□□ 0.88
RNF6Q9Y252 ESRRAP2-201ENST00000418437 1549 ntBASIC20.56■□□□□ 0.88
RNF6Q9Y252 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF6Q9Y252 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF6Q9Y252 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF6Q9Y252 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RNF6Q9Y252 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF6Q9Y252 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RNF6Q9Y252 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF6Q9Y252 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF6Q9Y252 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF6Q9Y252 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF6Q9Y252 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF6Q9Y252 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
RNF6Q9Y252 ZNRF2P3-201ENST00000424200 374 ntBASIC20.54■□□□□ 0.88
RNF6Q9Y252 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF6Q9Y252 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF6Q9Y252 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF6Q9Y252 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF6Q9Y252 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
RNF6Q9Y252 PKD1P6-201ENST00000343738 4769 ntBASIC20.54■□□□□ 0.88
RNF6Q9Y252 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF6Q9Y252 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF6Q9Y252 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF6Q9Y252 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF6Q9Y252 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF6Q9Y252 AC004448.1-201ENST00000458332 883 ntBASIC20.53■□□□□ 0.88
RNF6Q9Y252 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.53■□□□□ 0.88
RNF6Q9Y252 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF6Q9Y252 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF6Q9Y252 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF6Q9Y252 AC135279.3-201ENST00000610945 1311 ntBASIC20.53■□□□□ 0.88
RNF6Q9Y252 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF6Q9Y252 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF6Q9Y252 AL137060.1-201ENST00000618151 2648 ntBASIC20.52■□□□□ 0.88
RNF6Q9Y252 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF6Q9Y252 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RNF6Q9Y252 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF6Q9Y252 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF6Q9Y252 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF6Q9Y252 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF6Q9Y252 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RNF6Q9Y252 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF6Q9Y252 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms