Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56Q96MV1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEM56Q96MV1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 AC004987.1-201ENST00000428627 508 ntBASIC18.06■□□□□ 0.48
TMEM56Q96MV1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM56Q96MV1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM56Q96MV1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 AC010542.4-201ENST00000563151 1910 ntBASIC18.04■□□□□ 0.48
TMEM56Q96MV1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 TSPY13P-201ENST00000338964 914 ntBASIC18.04■□□□□ 0.48
TMEM56Q96MV1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 FAM99A-202ENST00000538190 1989 ntBASIC18.04■□□□□ 0.48
TMEM56Q96MV1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM56Q96MV1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM56Q96MV1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 MIR4281-201ENST00000580852 62 ntBASIC18.02■□□□□ 0.48
TMEM56Q96MV1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM56Q96MV1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM56Q96MV1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.02■□□□□ 0.47
TMEM56Q96MV1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM56Q96MV1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms