Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 AL031602.1-201ENST00000633169 911 ntBASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.25■□□□□ 0.99
LINC01555Q8NAE3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LINC01555Q8NAE3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 AC126544.1-201ENST00000580842 1059 ntBASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LINC01555Q8NAE3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 C1orf229-201ENST00000623686 2258 ntBASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 AC019069.1-201ENST00000610008 1333 ntBASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 LINC01960-201ENST00000563759 1884 ntBASIC21.22■□□□□ 0.99
LINC01555Q8NAE3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 AP005435.1-201ENST00000529293 1178 ntBASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC01555Q8NAE3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LINC01555Q8NAE3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 AC105265.2-201ENST00000467189 838 ntBASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.19■□□□□ 0.98
LINC01555Q8NAE3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 IGHV3-19-201ENST00000521488 291 ntBASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 AC087742.1-201ENST00000575880 1738 ntBASIC21.18■□□□□ 0.98
LINC01555Q8NAE3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms