Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 AC127496.7-201ENST00000625110 1798 ntBASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TTC9CQ8N5M4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.33■□□□□ 0.37
TTC9CQ8N5M4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TTC9CQ8N5M4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
TTC9CQ8N5M4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TTC9CQ8N5M4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 AC006455.2-201ENST00000429931 906 ntBASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 pRNA.6-201ENST00000610482 90 ntBASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 pRNA.5-201ENST00000612139 90 ntBASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 pRNA.11-201ENST00000618423 90 ntBASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 pRNA.13-201ENST00000619112 90 ntBASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TTC9CQ8N5M4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC9CQ8N5M4 AC133637.1-201ENST00000624115 1537 ntBASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 AC087742.1-201ENST00000575880 1738 ntBASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 MIR4466-201ENST00000606121 54 ntBASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 GUSBP5-202ENST00000510805 1989 ntBASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 LINC01960-201ENST00000563759 1884 ntBASIC17.31■□□□□ 0.36
TTC9CQ8N5M4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 AC131281.2-201ENST00000520478 145 ntBASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 DUX4L19-201ENST00000557448 1267 ntBASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9CQ8N5M4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 MIR3181-201ENST00000578512 73 ntBASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms