Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 AC005703.6-201ENST00000623265 1329 ntBASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC3Q5JS37 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC3Q5JS37 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC3Q5JS37 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 BX664725.1-201ENST00000438252 379 ntBASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 AC242852.2-201ENST00000615738 1807 ntBASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NHLRC3Q5JS37 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.82■□□□□ 0.6
NHLRC3Q5JS37 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 FP325331.1-202ENST00000623531 1380 ntBASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NHLRC3Q5JS37 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NHLRC3Q5JS37 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms