Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.17■■■□□ 2.1
COL15A1P39059 AC016769.1-201ENST00000409132 1010 ntBASIC28.17■■■□□ 2.1
COL15A1P39059 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.17■■■□□ 2.1
COL15A1P39059 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.17■■■□□ 2.1
COL15A1P39059 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL15A1P39059 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL15A1P39059 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC28.16■■■□□ 2.1
COL15A1P39059 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL15A1P39059 CDCA4P2-201ENST00000441182 718 ntBASIC28.16■■■□□ 2.1
COL15A1P39059 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.16■■■□□ 2.1
COL15A1P39059 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL15A1P39059 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
COL15A1P39059 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL15A1P39059 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
COL15A1P39059 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL15A1P39059 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL15A1P39059 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
COL15A1P39059 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL15A1P39059 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL15A1P39059 HSCB-202ENST00000398941 955 ntTSL 2 BASIC28.15■■■□□ 2.1
COL15A1P39059 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.15■■■□□ 2.1
COL15A1P39059 AC004854.2-201ENST00000608450 1441 ntBASIC28.15■■■□□ 2.1
COL15A1P39059 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
COL15A1P39059 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL15A1P39059 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL15A1P39059 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.14■■■□□ 2.1
COL15A1P39059 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL15A1P39059 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL15A1P39059 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.14■■■□□ 2.1
COL15A1P39059 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.14■■■□□ 2.1
COL15A1P39059 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL15A1P39059 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.14■■■□□ 2.1
COL15A1P39059 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
COL15A1P39059 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.14■■■□□ 2.09
COL15A1P39059 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
COL15A1P39059 AP004607.4-201ENST00000530158 1459 ntBASIC28.13■■■□□ 2.09
COL15A1P39059 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL15A1P39059 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.13■■■□□ 2.09
COL15A1P39059 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
COL15A1P39059 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL15A1P39059 GAS2L1P2-201ENST00000436355 1356 ntBASIC28.13■■■□□ 2.09
COL15A1P39059 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
COL15A1P39059 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
COL15A1P39059 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL15A1P39059 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.12■■■□□ 2.09
COL15A1P39059 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL15A1P39059 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
COL15A1P39059 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL15A1P39059 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL15A1P39059 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.11■■■□□ 2.09
COL15A1P39059 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.11■■■□□ 2.09
COL15A1P39059 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.11■■■□□ 2.09
COL15A1P39059 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL15A1P39059 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL15A1P39059 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL15A1P39059 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL15A1P39059 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.11■■■□□ 2.09
COL15A1P39059 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
COL15A1P39059 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL15A1P39059 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL15A1P39059 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL15A1P39059 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL15A1P39059 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
COL15A1P39059 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
COL15A1P39059 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
COL15A1P39059 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
COL15A1P39059 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC28.09■■■□□ 2.09
COL15A1P39059 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
COL15A1P39059 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
COL15A1P39059 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.09■■■□□ 2.09
COL15A1P39059 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.09■■■□□ 2.09
COL15A1P39059 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL15A1P39059 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
COL15A1P39059 BX005040.4-201ENST00000637145 1518 ntBASIC28.08■■■□□ 2.09
COL15A1P39059 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
COL15A1P39059 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
COL15A1P39059 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.08■■■□□ 2.09
COL15A1P39059 WWOX-218ENST00000627394 894 ntTSL 5 BASIC28.08■■■□□ 2.09
COL15A1P39059 AC004687.1-201ENST00000579003 1625 ntBASIC28.08■■■□□ 2.09
COL15A1P39059 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
COL15A1P39059 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.07■■■□□ 2.08
COL15A1P39059 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
COL15A1P39059 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL15A1P39059 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL15A1P39059 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
COL15A1P39059 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL15A1P39059 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL15A1P39059 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
COL15A1P39059 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.06■■■□□ 2.08
COL15A1P39059 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
COL15A1P39059 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL15A1P39059 AC079630.1-202ENST00000618127 1840 ntBASIC28.06■■■□□ 2.08
COL15A1P39059 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
COL15A1P39059 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL15A1P39059 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.05■■■□□ 2.08
COL15A1P39059 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
COL15A1P39059 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL15A1P39059 AC026185.1-201ENST00000445748 174 ntBASIC28.05■■■□□ 2.08
COL15A1P39059 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC28.05■■■□□ 2.08
COL15A1P39059 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms