Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CTNSO60931 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.64■□□□□ 0.9
CTNSO60931 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTNSO60931 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTNSO60931 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CTNSO60931 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNSO60931 MIR939-201ENST00000401314 82 ntBASIC20.64■□□□□ 0.89
CTNSO60931 AP001330.3-201ENST00000520123 633 ntBASIC20.64■□□□□ 0.89
CTNSO60931 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNSO60931 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTNSO60931 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
CTNSO60931 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTNSO60931 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.64■□□□□ 0.89
CTNSO60931 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CTNSO60931 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTNSO60931 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTNSO60931 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.63■□□□□ 0.89
CTNSO60931 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CTNSO60931 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.63■□□□□ 0.89
CTNSO60931 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTNSO60931 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CTNSO60931 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNSO60931 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTNSO60931 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.63■□□□□ 0.89
CTNSO60931 AC027682.1-201ENST00000562846 899 ntBASIC20.63■□□□□ 0.89
CTNSO60931 AF213884.3-201ENST00000563833 479 ntBASIC20.63■□□□□ 0.89
CTNSO60931 AC142381.2-201ENST00000566120 298 ntBASIC20.63■□□□□ 0.89
CTNSO60931 AC068587.7-201ENST00000641602 218 ntBASIC20.63■□□□□ 0.89
CTNSO60931 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNSO60931 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNSO60931 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNSO60931 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNSO60931 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTNSO60931 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTNSO60931 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNSO60931 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNSO60931 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNSO60931 AL031602.1-201ENST00000633169 911 ntBASIC20.62■□□□□ 0.89
CTNSO60931 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTNSO60931 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTNSO60931 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNSO60931 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTNSO60931 C9orf163-202ENST00000624034 2573 ntBASIC20.62■□□□□ 0.89
CTNSO60931 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
CTNSO60931 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.62■□□□□ 0.89
CTNSO60931 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CTNSO60931 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CTNSO60931 RASA4CP-201ENST00000424092 1398 ntBASIC20.61■□□□□ 0.89
CTNSO60931 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTNSO60931 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNSO60931 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CTNSO60931 AC099791.1-201ENST00000416440 715 ntBASIC20.61■□□□□ 0.89
CTNSO60931 AC091305.1-201ENST00000479476 895 ntBASIC20.61■□□□□ 0.89
CTNSO60931 AP005435.1-201ENST00000529293 1178 ntBASIC20.61■□□□□ 0.89
CTNSO60931 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNSO60931 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNSO60931 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNSO60931 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.61■□□□□ 0.89
CTNSO60931 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.61■□□□□ 0.89
CTNSO60931 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.61■□□□□ 0.89
CTNSO60931 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTNSO60931 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTNSO60931 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CTNSO60931 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNSO60931 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.6■□□□□ 0.89
CTNSO60931 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNSO60931 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNSO60931 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNSO60931 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.6■□□□□ 0.89
CTNSO60931 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTNSO60931 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNSO60931 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTNSO60931 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTNSO60931 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.59■□□□□ 0.89
CTNSO60931 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNSO60931 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CTNSO60931 AC126544.1-201ENST00000580842 1059 ntBASIC20.59■□□□□ 0.89
CTNSO60931 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTNSO60931 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.59■□□□□ 0.89
CTNSO60931 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTNSO60931 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNSO60931 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTNSO60931 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.58■□□□□ 0.89
CTNSO60931 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNSO60931 LINC01960-201ENST00000563759 1884 ntBASIC20.58■□□□□ 0.89
CTNSO60931 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTNSO60931 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CTNSO60931 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTNSO60931 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTNSO60931 CA15P2-201ENST00000611168 834 ntBASIC20.58■□□□□ 0.89
CTNSO60931 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTNSO60931 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CTNSO60931 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms