Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ITM2AO43736 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ITM2AO43736 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
ITM2AO43736 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ITM2AO43736 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ITM2AO43736 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ITM2AO43736 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ITM2AO43736 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ITM2AO43736 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ITM2AO43736 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.57■■□□□ 1.04
ITM2AO43736 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ITM2AO43736 LINC01529-204ENST00000636474 1715 ntBASIC21.57■■□□□ 1.04
ITM2AO43736 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ITM2AO43736 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.56■■□□□ 1.04
ITM2AO43736 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.56■■□□□ 1.04
ITM2AO43736 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ITM2AO43736 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ITM2AO43736 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ITM2AO43736 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.55■■□□□ 1.04
ITM2AO43736 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.55■■□□□ 1.04
ITM2AO43736 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ITM2AO43736 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.55■■□□□ 1.04
ITM2AO43736 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ITM2AO43736 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.55■■□□□ 1.04
ITM2AO43736 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ITM2AO43736 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.55■■□□□ 1.04
ITM2AO43736 LINC01960-201ENST00000563759 1884 ntBASIC21.55■■□□□ 1.04
ITM2AO43736 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ITM2AO43736 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.54■■□□□ 1.04
ITM2AO43736 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.54■■□□□ 1.04
ITM2AO43736 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ITM2AO43736 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ITM2AO43736 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.54■■□□□ 1.04
ITM2AO43736 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.54■■□□□ 1.04
ITM2AO43736 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.54■■□□□ 1.04
ITM2AO43736 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.54■■□□□ 1.04
ITM2AO43736 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ITM2AO43736 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ITM2AO43736 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ITM2AO43736 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ITM2AO43736 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ITM2AO43736 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.53■■□□□ 1.04
ITM2AO43736 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.53■■□□□ 1.04
ITM2AO43736 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.53■■□□□ 1.04
ITM2AO43736 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.53■■□□□ 1.04
ITM2AO43736 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ITM2AO43736 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ITM2AO43736 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ITM2AO43736 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
ITM2AO43736 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ITM2AO43736 AC005229.4-201ENST00000610085 2198 ntBASIC21.53■■□□□ 1.04
ITM2AO43736 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ITM2AO43736 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.52■■□□□ 1.04
ITM2AO43736 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ITM2AO43736 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ITM2AO43736 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.52■■□□□ 1.04
ITM2AO43736 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ITM2AO43736 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ITM2AO43736 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ITM2AO43736 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
ITM2AO43736 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ITM2AO43736 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 MIR4508-201ENST00000584178 70 ntBASIC21.51■■□□□ 1.03
ITM2AO43736 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ITM2AO43736 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ITM2AO43736 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ITM2AO43736 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ITM2AO43736 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.51■■□□□ 1.03
ITM2AO43736 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
ITM2AO43736 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ITM2AO43736 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ITM2AO43736 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
ITM2AO43736 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ITM2AO43736 FP325331.1-202ENST00000623531 1380 ntBASIC21.5■■□□□ 1.03
ITM2AO43736 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.5■■□□□ 1.03
ITM2AO43736 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ITM2AO43736 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ITM2AO43736 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ITM2AO43736 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ITM2AO43736 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ITM2AO43736 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ITM2AO43736 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ITM2AO43736 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.5■■□□□ 1.03
ITM2AO43736 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.5■■□□□ 1.03
ITM2AO43736 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ITM2AO43736 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.49■■□□□ 1.03
ITM2AO43736 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.49■■□□□ 1.03
ITM2AO43736 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ITM2AO43736 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ITM2AO43736 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ITM2AO43736 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ITM2AO43736 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ITM2AO43736 TSPY13P-201ENST00000338964 914 ntBASIC21.49■■□□□ 1.03
ITM2AO43736 AC103834.1-201ENST00000520383 144 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms