Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.82■□□□□ 0.44
NKX6-2Q9C056 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NKX6-2Q9C056 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.8■□□□□ 0.44
NKX6-2Q9C056 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-2Q9C056 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 FAM99A-202ENST00000538190 1989 ntBASIC17.78■□□□□ 0.44
NKX6-2Q9C056 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NKX6-2Q9C056 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.77■□□□□ 0.44
NKX6-2Q9C056 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX6-2Q9C056 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NKX6-2Q9C056 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.77■□□□□ 0.44
NKX6-2Q9C056 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.77■□□□□ 0.44
NKX6-2Q9C056 HLA-V-202ENST00000446817 847 ntBASIC17.77■□□□□ 0.44
NKX6-2Q9C056 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.77■□□□□ 0.44
NKX6-2Q9C056 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NKX6-2Q9C056 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NKX6-2Q9C056 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NKX6-2Q9C056 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms