Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC31.43■■■□□ 2.62
LTBP4Q8N2S1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.43■■■□□ 2.62
LTBP4Q8N2S1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LTBP4Q8N2S1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
LTBP4Q8N2S1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LTBP4Q8N2S1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.43■■■□□ 2.62
LTBP4Q8N2S1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 AC104187.1-201ENST00000607510 612 ntBASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
LTBP4Q8N2S1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.41■■■□□ 2.62
LTBP4Q8N2S1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LTBP4Q8N2S1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
LTBP4Q8N2S1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
LTBP4Q8N2S1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 AC006058.3-201ENST00000606217 1069 ntBASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC31.4■■■□□ 2.62
LTBP4Q8N2S1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 MIPEPP3-201ENST00000412105 444 ntBASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 AC128676.1-201ENST00000454392 318 ntBASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.39■■■□□ 2.62
LTBP4Q8N2S1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.38■■■□□ 2.61
LTBP4Q8N2S1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC31.38■■■□□ 2.61
LTBP4Q8N2S1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
LTBP4Q8N2S1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LTBP4Q8N2S1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC31.38■■■□□ 2.61
LTBP4Q8N2S1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
LTBP4Q8N2S1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
LTBP4Q8N2S1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
LTBP4Q8N2S1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC31.37■■■□□ 2.61
LTBP4Q8N2S1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
LTBP4Q8N2S1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LTBP4Q8N2S1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LTBP4Q8N2S1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
LTBP4Q8N2S1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
LTBP4Q8N2S1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LTBP4Q8N2S1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
LTBP4Q8N2S1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC31.36■■■□□ 2.61
LTBP4Q8N2S1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.36■■■□□ 2.61
LTBP4Q8N2S1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
LTBP4Q8N2S1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC31.36■■■□□ 2.61
LTBP4Q8N2S1 GXYLT1P3-201ENST00000453058 1193 ntBASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 MIR6089-201ENST00000616698 64 ntBASIC31.35■■■□□ 2.61
LTBP4Q8N2S1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LTBP4Q8N2S1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LTBP4Q8N2S1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC31.34■■■□□ 2.61
LTBP4Q8N2S1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LTBP4Q8N2S1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LTBP4Q8N2S1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
LTBP4Q8N2S1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 MYC-209ENST00000641252 345 ntBASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC31.33■■■□□ 2.61
LTBP4Q8N2S1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
LTBP4Q8N2S1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
LTBP4Q8N2S1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
LTBP4Q8N2S1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.32■■■□□ 2.6
LTBP4Q8N2S1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms