Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCR9P51686 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCR9P51686 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCR9P51686 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.4■□□□□ 0.7
CCR9P51686 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.4■□□□□ 0.7
CCR9P51686 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCR9P51686 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCR9P51686 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCR9P51686 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.39■□□□□ 0.7
CCR9P51686 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCR9P51686 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.39■□□□□ 0.69
CCR9P51686 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.39■□□□□ 0.69
CCR9P51686 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.39■□□□□ 0.69
CCR9P51686 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCR9P51686 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCR9P51686 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCR9P51686 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.38■□□□□ 0.69
CCR9P51686 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.38■□□□□ 0.69
CCR9P51686 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.38■□□□□ 0.69
CCR9P51686 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCR9P51686 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCR9P51686 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCR9P51686 FP325331.1-202ENST00000623531 1380 ntBASIC19.38■□□□□ 0.69
CCR9P51686 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCR9P51686 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCR9P51686 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.37■□□□□ 0.69
CCR9P51686 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.37■□□□□ 0.69
CCR9P51686 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCR9P51686 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCR9P51686 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.37■□□□□ 0.69
CCR9P51686 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCR9P51686 AC080038.3-201ENST00000623346 1952 ntBASIC19.37■□□□□ 0.69
CCR9P51686 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCR9P51686 LINC01529-204ENST00000636474 1715 ntBASIC19.37■□□□□ 0.69
CCR9P51686 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
CCR9P51686 SLC25A24-204ENST00000569674 2357 ntBASIC19.36■□□□□ 0.69
CCR9P51686 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCR9P51686 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCR9P51686 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.36■□□□□ 0.69
CCR9P51686 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.36■□□□□ 0.69
CCR9P51686 AC137630.3-201ENST00000607245 391 ntBASIC19.36■□□□□ 0.69
CCR9P51686 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.36■□□□□ 0.69
CCR9P51686 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCR9P51686 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCR9P51686 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCR9P51686 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCR9P51686 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCR9P51686 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCR9P51686 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.35■□□□□ 0.69
CCR9P51686 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.35■□□□□ 0.69
CCR9P51686 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCR9P51686 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCR9P51686 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCR9P51686 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCR9P51686 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCR9P51686 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.34■□□□□ 0.69
CCR9P51686 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 MIR6722-201ENST00000617286 78 ntBASIC19.34■□□□□ 0.69
CCR9P51686 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCR9P51686 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.34■□□□□ 0.69
CCR9P51686 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCR9P51686 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CCR9P51686 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCR9P51686 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCR9P51686 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCR9P51686 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCR9P51686 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.33■□□□□ 0.69
CCR9P51686 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCR9P51686 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCR9P51686 AC103834.1-201ENST00000520383 144 ntBASIC19.33■□□□□ 0.68
CCR9P51686 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.33■□□□□ 0.68
CCR9P51686 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.33■□□□□ 0.68
CCR9P51686 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCR9P51686 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CCR9P51686 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCR9P51686 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.33■□□□□ 0.68
CCR9P51686 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCR9P51686 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCR9P51686 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCR9P51686 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCR9P51686 AC005703.6-201ENST00000623265 1329 ntBASIC19.32■□□□□ 0.68
CCR9P51686 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCR9P51686 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCR9P51686 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms