Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP6P35125 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.25■■■□□ 2.43
USP6P35125 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.25■■■□□ 2.43
USP6P35125 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.25■■■□□ 2.43
USP6P35125 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
USP6P35125 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
USP6P35125 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
USP6P35125 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC30.24■■■□□ 2.43
USP6P35125 AC004687.1-201ENST00000579003 1625 ntBASIC30.24■■■□□ 2.43
USP6P35125 ID1-201ENST00000376105 1233 ntBASIC30.24■■■□□ 2.43
USP6P35125 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.24■■■□□ 2.43
USP6P35125 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.24■■■□□ 2.43
USP6P35125 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
USP6P35125 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.24■■■□□ 2.43
USP6P35125 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
USP6P35125 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC30.23■■■□□ 2.43
USP6P35125 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.23■■■□□ 2.43
USP6P35125 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.23■■■□□ 2.43
USP6P35125 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
USP6P35125 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
USP6P35125 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC30.23■■■□□ 2.43
USP6P35125 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP6P35125 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
USP6P35125 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP6P35125 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP6P35125 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP6P35125 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP6P35125 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC30.22■■■□□ 2.43
USP6P35125 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
USP6P35125 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP6P35125 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP6P35125 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.22■■■□□ 2.43
USP6P35125 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.22■■■□□ 2.43
USP6P35125 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.22■■■□□ 2.43
USP6P35125 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC30.21■■■□□ 2.43
USP6P35125 AC004812.2-201ENST00000611079 2094 ntBASIC30.21■■■□□ 2.43
USP6P35125 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.21■■■□□ 2.43
USP6P35125 RAP2CP1-201ENST00000605103 478 ntBASIC30.21■■■□□ 2.43
USP6P35125 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP6P35125 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP6P35125 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
USP6P35125 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
USP6P35125 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC30.2■■■□□ 2.43
USP6P35125 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.2■■■□□ 2.42
USP6P35125 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
USP6P35125 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
USP6P35125 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
USP6P35125 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.2■■■□□ 2.42
USP6P35125 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
USP6P35125 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP6P35125 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP6P35125 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP6P35125 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
USP6P35125 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.19■■■□□ 2.42
USP6P35125 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP6P35125 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.19■■■□□ 2.42
USP6P35125 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
USP6P35125 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
USP6P35125 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
USP6P35125 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP6P35125 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP6P35125 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP6P35125 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
USP6P35125 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.18■■■□□ 2.42
USP6P35125 LINC01124-201ENST00000409786 2117 ntBASIC30.18■■■□□ 2.42
USP6P35125 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP6P35125 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
USP6P35125 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
USP6P35125 DENND3-207ENST00000518347 850 ntTSL 2 BASIC30.17■■■□□ 2.42
USP6P35125 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
USP6P35125 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
USP6P35125 AP004607.4-201ENST00000530158 1459 ntBASIC30.16■■■□□ 2.42
USP6P35125 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC30.16■■■□□ 2.42
USP6P35125 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.16■■■□□ 2.42
USP6P35125 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.16■■■□□ 2.42
USP6P35125 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.16■■■□□ 2.42
USP6P35125 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.16■■■□□ 2.42
USP6P35125 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.16■■■□□ 2.42
USP6P35125 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.16■■■□□ 2.42
USP6P35125 AC068587.7-201ENST00000641602 218 ntBASIC30.16■■■□□ 2.42
USP6P35125 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
USP6P35125 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.16■■■□□ 2.42
USP6P35125 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.16■■■□□ 2.42
USP6P35125 AC004854.2-201ENST00000608450 1441 ntBASIC30.16■■■□□ 2.42
USP6P35125 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
USP6P35125 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.15■■■□□ 2.42
USP6P35125 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.15■■■□□ 2.42
USP6P35125 SMUG1P1-201ENST00000590640 811 ntBASIC30.15■■■□□ 2.42
USP6P35125 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.15■■■□□ 2.42
USP6P35125 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
USP6P35125 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
USP6P35125 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP6P35125 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
USP6P35125 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.15■■■□□ 2.42
USP6P35125 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.14■■■□□ 2.42
USP6P35125 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
USP6P35125 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
USP6P35125 BX005040.4-201ENST00000637145 1518 ntBASIC30.14■■■□□ 2.42
USP6P35125 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.14■■■□□ 2.42
USP6P35125 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms