Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCK1P16333 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCK1P16333 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.82■□□□□ 0.92
NCK1P16333 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCK1P16333 RARRES2P2-201ENST00000394842 485 ntBASIC20.82■□□□□ 0.92
NCK1P16333 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.82■□□□□ 0.92
NCK1P16333 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCK1P16333 AC139795.1-202ENST00000500444 432 ntBASIC20.82■□□□□ 0.92
NCK1P16333 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.82■□□□□ 0.92
NCK1P16333 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.82■□□□□ 0.92
NCK1P16333 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.82■□□□□ 0.92
NCK1P16333 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCK1P16333 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.81■□□□□ 0.92
NCK1P16333 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCK1P16333 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.81■□□□□ 0.92
NCK1P16333 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NCK1P16333 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCK1P16333 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCK1P16333 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCK1P16333 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.8■□□□□ 0.92
NCK1P16333 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCK1P16333 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCK1P16333 FAM99A-202ENST00000538190 1989 ntBASIC20.8■□□□□ 0.92
NCK1P16333 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NCK1P16333 MIR4281-201ENST00000580852 62 ntBASIC20.8■□□□□ 0.92
NCK1P16333 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.8■□□□□ 0.92
NCK1P16333 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.8■□□□□ 0.92
NCK1P16333 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.8■□□□□ 0.92
NCK1P16333 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCK1P16333 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCK1P16333 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NCK1P16333 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCK1P16333 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCK1P16333 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCK1P16333 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.79■□□□□ 0.92
NCK1P16333 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCK1P16333 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.79■□□□□ 0.92
NCK1P16333 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.79■□□□□ 0.92
NCK1P16333 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.79■□□□□ 0.92
NCK1P16333 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCK1P16333 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NCK1P16333 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NCK1P16333 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
NCK1P16333 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NCK1P16333 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.78■□□□□ 0.92
NCK1P16333 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.78■□□□□ 0.92
NCK1P16333 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NCK1P16333 AC144652.1-201ENST00000609974 1624 ntBASIC20.78■□□□□ 0.92
NCK1P16333 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.78■□□□□ 0.92
NCK1P16333 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCK1P16333 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NCK1P16333 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCK1P16333 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.77■□□□□ 0.92
NCK1P16333 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCK1P16333 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCK1P16333 AC010542.4-201ENST00000563151 1910 ntBASIC20.77■□□□□ 0.92
NCK1P16333 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NCK1P16333 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCK1P16333 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCK1P16333 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCK1P16333 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCK1P16333 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
NCK1P16333 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
NCK1P16333 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
NCK1P16333 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.77■□□□□ 0.91
NCK1P16333 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.76■□□□□ 0.91
NCK1P16333 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
NCK1P16333 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NCK1P16333 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.76■□□□□ 0.91
NCK1P16333 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.76■□□□□ 0.91
NCK1P16333 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NCK1P16333 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCK1P16333 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCK1P16333 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.75■□□□□ 0.91
NCK1P16333 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.75■□□□□ 0.91
NCK1P16333 THA1P-201ENST00000590384 1145 ntBASIC20.75■□□□□ 0.91
NCK1P16333 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NCK1P16333 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms