Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 LINC01529-204ENST00000636474 1715 ntBASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 DUX4L19-201ENST00000557448 1267 ntBASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 AC079630.1-202ENST00000618127 1840 ntBASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 C1orf229-201ENST00000623686 2258 ntBASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 DUX4L4-201ENST00000566884 1269 ntBASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV23-1A0A0A0MS06 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 AC009086.3-201ENST00000623486 1008 ntBASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRBV23-1A0A0A0MS06 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV23-1A0A0A0MS06 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV23-1A0A0A0MS06 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 AC099791.2-201ENST00000605725 427 ntBASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV23-1A0A0A0MS06 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 AL138724.1-201ENST00000606771 1088 ntBASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV23-1A0A0A0MS06 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms