Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 AL356740.2-201ENST00000601559 647 ntBASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 AL117332.1-201ENST00000622628 974 ntBASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRGV1A0A0A0MS02 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRGV1A0A0A0MS02 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRGV1A0A0A0MS02 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.95■□□□□ 0.14
TRGV1A0A0A0MS02 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 AC233723.2-201ENST00000623798 2106 ntBASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRGV1A0A0A0MS02 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 C17orf82-201ENST00000623772 1530 ntBASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRGV1A0A0A0MS02 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 AC009086.3-201ENST00000623486 1008 ntBASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRGV1A0A0A0MS02 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 AL356441.2-201ENST00000443009 864 ntBASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 DUX4L4-201ENST00000566884 1269 ntBASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRGV1A0A0A0MS02 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRGV1A0A0A0MS02 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms