Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.58■□□□□ 0.89
DTX4Q9Y2E6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
DTX4Q9Y2E6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
DTX4Q9Y2E6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 AC133637.1-201ENST00000624115 1537 ntBASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 AC068473.5-201ENST00000616428 2072 ntBASIC20.57■□□□□ 0.88
DTX4Q9Y2E6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 AC110285.6-201ENST00000617652 491 ntBASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DTX4Q9Y2E6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 DUX4L19-201ENST00000557448 1267 ntBASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
DTX4Q9Y2E6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 C1orf229-201ENST00000623686 2258 ntBASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 AC133561.1-201ENST00000568600 2415 ntBASIC20.54■□□□□ 0.88
DTX4Q9Y2E6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 AC024257.2-201ENST00000549699 147 ntBASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 AL136162.1-201ENST00000607711 1078 ntBASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.53■□□□□ 0.88
DTX4Q9Y2E6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 AL138724.1-201ENST00000606771 1088 ntBASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.52■□□□□ 0.88
DTX4Q9Y2E6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
DTX4Q9Y2E6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DTX4Q9Y2E6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.51■□□□□ 0.87
DTX4Q9Y2E6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.51■□□□□ 0.87
DTX4Q9Y2E6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms