Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NSUN3Q9H649 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
NSUN3Q9H649 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
NSUN3Q9H649 CROCCP5-201ENST00000436658 830 ntBASIC23.63■■□□□ 1.37
NSUN3Q9H649 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.63■■□□□ 1.37
NSUN3Q9H649 TPRG1LP1-201ENST00000598702 760 ntBASIC23.63■■□□□ 1.37
NSUN3Q9H649 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 DUX4L4-201ENST00000566884 1269 ntBASIC23.62■■□□□ 1.37
NSUN3Q9H649 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
NSUN3Q9H649 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 FP325331.1-202ENST00000623531 1380 ntBASIC23.62■■□□□ 1.37
NSUN3Q9H649 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NSUN3Q9H649 AP004607.4-201ENST00000530158 1459 ntBASIC23.62■■□□□ 1.37
NSUN3Q9H649 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
NSUN3Q9H649 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.61■■□□□ 1.37
NSUN3Q9H649 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.61■■□□□ 1.37
NSUN3Q9H649 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NSUN3Q9H649 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NSUN3Q9H649 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NSUN3Q9H649 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NSUN3Q9H649 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.61■■□□□ 1.37
NSUN3Q9H649 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NSUN3Q9H649 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NSUN3Q9H649 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 AC004854.2-201ENST00000608450 1441 ntBASIC23.6■■□□□ 1.37
NSUN3Q9H649 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.6■■□□□ 1.37
NSUN3Q9H649 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.6■■□□□ 1.37
NSUN3Q9H649 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.6■■□□□ 1.37
NSUN3Q9H649 NCF1B-203ENST00000435988 1254 ntBASIC23.6■■□□□ 1.37
NSUN3Q9H649 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.6■■□□□ 1.37
NSUN3Q9H649 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.6■■□□□ 1.37
NSUN3Q9H649 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NSUN3Q9H649 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NSUN3Q9H649 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NSUN3Q9H649 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
NSUN3Q9H649 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NSUN3Q9H649 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NSUN3Q9H649 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
NSUN3Q9H649 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NSUN3Q9H649 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NSUN3Q9H649 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NSUN3Q9H649 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.58■■□□□ 1.37
NSUN3Q9H649 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.58■■□□□ 1.37
NSUN3Q9H649 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.58■■□□□ 1.37
NSUN3Q9H649 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.58■■□□□ 1.37
NSUN3Q9H649 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
NSUN3Q9H649 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
NSUN3Q9H649 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NSUN3Q9H649 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NSUN3Q9H649 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NSUN3Q9H649 KRT19P1-201ENST00000405746 1186 ntBASIC23.57■■□□□ 1.36
NSUN3Q9H649 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NSUN3Q9H649 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NSUN3Q9H649 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.57■■□□□ 1.36
NSUN3Q9H649 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NSUN3Q9H649 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NSUN3Q9H649 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NSUN3Q9H649 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.57■■□□□ 1.36
NSUN3Q9H649 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.57■■□□□ 1.36
NSUN3Q9H649 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.56■■□□□ 1.36
NSUN3Q9H649 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.56■■□□□ 1.36
NSUN3Q9H649 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.56■■□□□ 1.36
NSUN3Q9H649 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NSUN3Q9H649 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NSUN3Q9H649 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NSUN3Q9H649 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.55■■□□□ 1.36
NSUN3Q9H649 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NSUN3Q9H649 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.54■■□□□ 1.36
NSUN3Q9H649 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms