Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.82■■□□□ 1.08
SHCBP1LQ9BZQ2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHCBP1LQ9BZQ2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHCBP1LQ9BZQ2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.82■■□□□ 1.08
SHCBP1LQ9BZQ2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 AL024507.2-201ENST00000606070 2574 ntBASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHCBP1LQ9BZQ2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 AC242852.2-201ENST00000615738 1807 ntBASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 KRT8P33-201ENST00000508125 1423 ntBASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHCBP1LQ9BZQ2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.79■■□□□ 1.08
SHCBP1LQ9BZQ2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHCBP1LQ9BZQ2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHCBP1LQ9BZQ2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHCBP1LQ9BZQ2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SHCBP1LQ9BZQ2 ESRRAP2-201ENST00000418437 1549 ntBASIC21.77■■□□□ 1.08
SHCBP1LQ9BZQ2 AL033527.3-201ENST00000566366 1196 ntBASIC21.77■■□□□ 1.08
SHCBP1LQ9BZQ2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHCBP1LQ9BZQ2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SHCBP1LQ9BZQ2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SHCBP1LQ9BZQ2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHCBP1LQ9BZQ2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHCBP1LQ9BZQ2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHCBP1LQ9BZQ2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.76■■□□□ 1.07
SHCBP1LQ9BZQ2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHCBP1LQ9BZQ2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.76■■□□□ 1.07
SHCBP1LQ9BZQ2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 AC103834.1-201ENST00000520383 144 ntBASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHCBP1LQ9BZQ2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 AC080038.3-201ENST00000623346 1952 ntBASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHCBP1LQ9BZQ2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms