Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 AC091305.1-201ENST00000479476 895 ntBASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 AL499627.2-201ENST00000606283 725 ntBASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC9Q8TBE3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 AC012676.1-201ENST00000574705 1949 ntBASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 AC027682.1-201ENST00000562846 899 ntBASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.88■□□□□ 0.77
FNDC9Q8TBE3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 AL353803.4-201ENST00000565882 1934 ntBASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC9Q8TBE3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.86■□□□□ 0.77
FNDC9Q8TBE3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 RASA4CP-201ENST00000424092 1398 ntBASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 AC099791.1-201ENST00000416440 715 ntBASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 BX842568.3-201ENST00000418104 571 ntBASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 AC233992.3-201ENST00000607491 485 ntBASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 CA15P2-201ENST00000611168 834 ntBASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.85■□□□□ 0.77
FNDC9Q8TBE3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 ZNRF2P3-201ENST00000424200 374 ntBASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC9Q8TBE3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 SLC47A1P1-202ENST00000449666 945 ntBASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 AC105265.2-201ENST00000467189 838 ntBASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC9Q8TBE3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FNDC9Q8TBE3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FNDC9Q8TBE3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
FNDC9Q8TBE3 ANOS2P-203ENST00000472227 1816 ntBASIC19.83■□□□□ 0.76
FNDC9Q8TBE3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
FNDC9Q8TBE3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FNDC9Q8TBE3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.82■□□□□ 0.76
FNDC9Q8TBE3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
FNDC9Q8TBE3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC9Q8TBE3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
FNDC9Q8TBE3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.82■□□□□ 0.76
FNDC9Q8TBE3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms