Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.33■■□□□ 1.01
KRT78Q8N1N4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT78Q8N1N4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.33■■□□□ 1
KRT78Q8N1N4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
KRT78Q8N1N4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.33■■□□□ 1
KRT78Q8N1N4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT78Q8N1N4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.32■■□□□ 1
KRT78Q8N1N4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT78Q8N1N4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
KRT78Q8N1N4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.32■■□□□ 1
KRT78Q8N1N4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.32■■□□□ 1
KRT78Q8N1N4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT78Q8N1N4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
KRT78Q8N1N4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
KRT78Q8N1N4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.32■■□□□ 1
KRT78Q8N1N4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KRT78Q8N1N4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
KRT78Q8N1N4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.31■■□□□ 1
KRT78Q8N1N4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT78Q8N1N4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
KRT78Q8N1N4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.31■■□□□ 1
KRT78Q8N1N4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.3■■□□□ 1
KRT78Q8N1N4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.3■■□□□ 1
KRT78Q8N1N4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.3■■□□□ 1
KRT78Q8N1N4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.3■■□□□ 1
KRT78Q8N1N4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
KRT78Q8N1N4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 AC099791.2-201ENST00000605725 427 ntBASIC21.3■■□□□ 1
KRT78Q8N1N4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.3■■□□□ 1
KRT78Q8N1N4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.3■■□□□ 1
KRT78Q8N1N4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRT78Q8N1N4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT78Q8N1N4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
KRT78Q8N1N4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT78Q8N1N4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.29■■□□□ 1
KRT78Q8N1N4 AC131212.1-201ENST00000613771 668 ntBASIC21.29■■□□□ 1
KRT78Q8N1N4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT78Q8N1N4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
KRT78Q8N1N4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRT78Q8N1N4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.29■■□□□ 1
KRT78Q8N1N4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.28■■□□□ 1
KRT78Q8N1N4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
KRT78Q8N1N4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KRT78Q8N1N4 AL499627.2-201ENST00000606283 725 ntBASIC21.28■■□□□ 1
KRT78Q8N1N4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KRT78Q8N1N4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
KRT78Q8N1N4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT78Q8N1N4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
KRT78Q8N1N4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
KRT78Q8N1N4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT78Q8N1N4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KRT78Q8N1N4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.27■■□□□ 1
KRT78Q8N1N4 AC131281.2-201ENST00000520478 145 ntBASIC21.27■■□□□ 1
KRT78Q8N1N4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.27■■□□□ 1
KRT78Q8N1N4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.27■■□□□ 1
KRT78Q8N1N4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.27■■□□□ 1
KRT78Q8N1N4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KRT78Q8N1N4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 AC133561.1-201ENST00000568600 2415 ntBASIC21.26■□□□□ 0.99
KRT78Q8N1N4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 MIR4466-201ENST00000606121 54 ntBASIC21.26■□□□□ 0.99
KRT78Q8N1N4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KRT78Q8N1N4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms