Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 AC087393.1-201ENST00000582896 145 ntBASIC17.48■□□□□ 0.39
FAM78BQ5VT40 NTF6A-201ENST00000591175 560 ntBASIC17.48■□□□□ 0.39
FAM78BQ5VT40 AC129492.7-201ENST00000622992 756 ntBASIC17.48■□□□□ 0.39
FAM78BQ5VT40 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM78BQ5VT40 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 AC131274.2-201ENST00000580697 1507 ntBASIC17.47■□□□□ 0.39
FAM78BQ5VT40 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM78BQ5VT40 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FAM78BQ5VT40 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
FAM78BQ5VT40 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 AC079630.1-202ENST00000618127 1840 ntBASIC17.45■□□□□ 0.38
FAM78BQ5VT40 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM78BQ5VT40 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 AL121603.2-201ENST00000557373 2117 ntBASIC17.44■□□□□ 0.38
FAM78BQ5VT40 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM78BQ5VT40 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM78BQ5VT40 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.42■□□□□ 0.38
FAM78BQ5VT40 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FAM78BQ5VT40 AC092053.2-201ENST00000640557 1818 ntBASIC17.42■□□□□ 0.38
FAM78BQ5VT40 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.42■□□□□ 0.38
FAM78BQ5VT40 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms