Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 MED17-227ENST00000640521 2047 ntTSL 5 BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 HLA-L-209ENST00000420110 1011 ntBASIC34.1■■■■□ 3.05
CDC42BPAQ5VT25 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
CDC42BPAQ5VT25 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC34.09■■■■□ 3.05
CDC42BPAQ5VT25 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC34.09■■■■□ 3.05
CDC42BPAQ5VT25 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC34.09■■■■□ 3.05
CDC42BPAQ5VT25 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 AC073111.5-205ENST00000641717 521 ntBASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 AC079630.1-202ENST00000618127 1840 ntBASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CDC42BPAQ5VT25 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
CDC42BPAQ5VT25 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
CDC42BPAQ5VT25 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC34.07■■■■□ 3.04
CDC42BPAQ5VT25 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC34.07■■■■□ 3.04
CDC42BPAQ5VT25 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CDC42BPAQ5VT25 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CDC42BPAQ5VT25 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC34.06■■■■□ 3.04
CDC42BPAQ5VT25 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CDC42BPAQ5VT25 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CDC42BPAQ5VT25 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
CDC42BPAQ5VT25 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC34.05■■■■□ 3.04
CDC42BPAQ5VT25 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC34.05■■■■□ 3.04
CDC42BPAQ5VT25 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
CDC42BPAQ5VT25 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
CDC42BPAQ5VT25 AC016769.1-201ENST00000409132 1010 ntBASIC34.04■■■■□ 3.04
CDC42BPAQ5VT25 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC34.04■■■■□ 3.04
CDC42BPAQ5VT25 LINC01529-204ENST00000636474 1715 ntBASIC34.04■■■■□ 3.04
CDC42BPAQ5VT25 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
CDC42BPAQ5VT25 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
CDC42BPAQ5VT25 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC34.04■■■■□ 3.04
CDC42BPAQ5VT25 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC34.04■■■■□ 3.04
CDC42BPAQ5VT25 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 EED-207ENST00000528180 1745 ntTSL 5 BASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 AC142381.3-201ENST00000568208 1670 ntBASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC34.03■■■■□ 3.04
CDC42BPAQ5VT25 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
CDC42BPAQ5VT25 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC34.02■■■■□ 3.04
CDC42BPAQ5VT25 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
CDC42BPAQ5VT25 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
CDC42BPAQ5VT25 DBI-210ENST00000542275 757 ntTSL 5 BASIC34.01■■■■□ 3.04
CDC42BPAQ5VT25 AC137761.2-201ENST00000561729 223 ntBASIC34.01■■■■□ 3.04
CDC42BPAQ5VT25 AC145350.3-201ENST00000569033 163 ntBASIC34.01■■■■□ 3.04
CDC42BPAQ5VT25 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
CDC42BPAQ5VT25 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC34.01■■■■□ 3.04
CDC42BPAQ5VT25 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
CDC42BPAQ5VT25 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
CDC42BPAQ5VT25 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.03
CDC42BPAQ5VT25 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC34.01■■■■□ 3.03
CDC42BPAQ5VT25 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC34.01■■■■□ 3.03
CDC42BPAQ5VT25 GALNS-213ENST00000569433 723 ntTSL 3 BASIC34.01■■■■□ 3.03
CDC42BPAQ5VT25 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC34■■■■□ 3.03
CDC42BPAQ5VT25 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC34■■■■□ 3.03
CDC42BPAQ5VT25 TK2-208ENST00000545043 1120 ntTSL 2 BASIC34■■■■□ 3.03
CDC42BPAQ5VT25 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC34■■■■□ 3.03
CDC42BPAQ5VT25 WWOX-218ENST00000627394 894 ntTSL 5 BASIC34■■■■□ 3.03
CDC42BPAQ5VT25 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC34■■■■□ 3.03
CDC42BPAQ5VT25 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 AC004854.2-201ENST00000608450 1441 ntBASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 AP004607.4-201ENST00000530158 1459 ntBASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC33.99■■■■□ 3.03
CDC42BPAQ5VT25 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC33.98■■■■□ 3.03
CDC42BPAQ5VT25 STX7-201ENST00000367937 1090 ntTSL 5 BASIC33.98■■■■□ 3.03
CDC42BPAQ5VT25 RARA-203ENST00000394086 2008 ntTSL 2 BASIC33.98■■■■□ 3.03
CDC42BPAQ5VT25 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC33.98■■■■□ 3.03
CDC42BPAQ5VT25 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
CDC42BPAQ5VT25 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
CDC42BPAQ5VT25 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
CDC42BPAQ5VT25 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CDC42BPAQ5VT25 HSCB-202ENST00000398941 955 ntTSL 2 BASIC33.97■■■■□ 3.03
CDC42BPAQ5VT25 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC33.96■■■■□ 3.03
CDC42BPAQ5VT25 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC33.96■■■■□ 3.03
CDC42BPAQ5VT25 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC33.96■■■■□ 3.03
CDC42BPAQ5VT25 CDCA4P2-201ENST00000441182 718 ntBASIC33.96■■■■□ 3.03
CDC42BPAQ5VT25 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC33.96■■■■□ 3.03
CDC42BPAQ5VT25 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC33.96■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms