Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.2■□□□□ 0.66
SNAI3Q3KNW1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNAI3Q3KNW1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.2■□□□□ 0.66
SNAI3Q3KNW1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SNAI3Q3KNW1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAI3Q3KNW1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNAI3Q3KNW1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 MIR3621-201ENST00000580529 85 ntBASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SNAI3Q3KNW1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 EP400NL-214ENST00000641289 2402 ntBASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 AL356441.2-201ENST00000443009 864 ntBASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 AL356740.2-201ENST00000601559 647 ntBASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 AC009086.3-201ENST00000623486 1008 ntBASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNAI3Q3KNW1 AC079834.2-201ENST00000609776 1949 ntBASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNAI3Q3KNW1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 AC004687.1-201ENST00000579003 1625 ntBASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNAI3Q3KNW1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAI3Q3KNW1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAI3Q3KNW1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SNAI3Q3KNW1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNAI3Q3KNW1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.15■□□□□ 0.66
SNAI3Q3KNW1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNAI3Q3KNW1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.14■□□□□ 0.66
SNAI3Q3KNW1 AC087742.1-201ENST00000575880 1738 ntBASIC19.14■□□□□ 0.66
SNAI3Q3KNW1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SNAI3Q3KNW1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNAI3Q3KNW1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms