Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 PDR5YOR153W 4536 nt4.48□□□□□ -1.69
PDH1Q12428 SUT1YGL162W 900 nt4.48□□□□□ -1.69
PDH1Q12428 CNB1YKL190W 528 nt4.48□□□□□ -1.69
PDH1Q12428 YLR462WYLR462W 609 nt4.48□□□□□ -1.69
PDH1Q12428 CTL1YMR180C 963 nt4.48□□□□□ -1.69
PDH1Q12428 snR37snR37 386 nt4.48□□□□□ -1.69
PDH1Q12428 UGA3YDL170W 1587 nt4.48□□□□□ -1.69
PDH1Q12428 PHO87YCR037C 2772 nt4.47□□□□□ -1.69
PDH1Q12428 YDR336WYDR336W 945 nt4.47□□□□□ -1.69
PDH1Q12428 TRP4YDR354W 1143 nt4.47□□□□□ -1.69
PDH1Q12428 DCV1YFR012W 609 nt4.47□□□□□ -1.69
PDH1Q12428 YGL199CYGL199C 471 nt4.47□□□□□ -1.69
PDH1Q12428 ZRT1YGL255W 1131 nt4.47□□□□□ -1.69
PDH1Q12428 OKP1YGR179C 1221 nt4.47□□□□□ -1.69
PDH1Q12428 MRP4YHL004W 1185 nt4.47□□□□□ -1.69
PDH1Q12428 COA3YJL062W-A 258 nt4.47□□□□□ -1.69
PDH1Q12428 YKL071WYKL071W 771 nt4.47□□□□□ -1.69
PDH1Q12428 EMG1YLR186W 759 nt4.47□□□□□ -1.69
PDH1Q12428 BAG7YOR134W 1230 nt4.47□□□□□ -1.69
PDH1Q12428 MPD1YOR288C 957 nt4.47□□□□□ -1.69
PDH1Q12428 SNF8YPL002C 702 nt4.47□□□□□ -1.69
PDH1Q12428 NCE102YPR149W 522 nt4.47□□□□□ -1.69
PDH1Q12428 PAN1YIR006C 4443 nt4.47□□□□□ -1.69
PDH1Q12428 NMD3YHR170W 1557 nt4.47□□□□□ -1.69
PDH1Q12428 SYF1YDR416W 2580 nt4.46□□□□□ -1.7
PDH1Q12428 RAD7YJR052W 1698 nt4.46□□□□□ -1.7
PDH1Q12428 PUS9YDL036C 1389 nt4.46□□□□□ -1.7
PDH1Q12428 RPB7YDR404C 516 nt4.46□□□□□ -1.7
PDH1Q12428 SNA2YDR525W-A 240 nt4.46□□□□□ -1.7
PDH1Q12428 AUA1YFL010W-A 285 nt4.46□□□□□ -1.7
PDH1Q12428 SSB2YNL209W 1842 nt4.46□□□□□ -1.7
PDH1Q12428 ADP1YCR011C 3150 nt4.45□□□□□ -1.7
PDH1Q12428 CTT1YGR088W 1689 nt4.45□□□□□ -1.7
PDH1Q12428 NAM9YNL137C 1461 nt4.45□□□□□ -1.7
PDH1Q12428 TMA17YDL110C 453 nt4.45□□□□□ -1.7
PDH1Q12428 ARG82YDR173C 1068 nt4.45□□□□□ -1.7
PDH1Q12428 YFL041W-AYFL041W-A 192 nt4.45□□□□□ -1.7
PDH1Q12428 SRB5YGR104C 924 nt4.45□□□□□ -1.7
PDH1Q12428 TDA5YLR426W 981 nt4.45□□□□□ -1.7
PDH1Q12428 SPO20YMR017W 1194 nt4.45□□□□□ -1.7
PDH1Q12428 MRPS8YMR158W 468 nt4.45□□□□□ -1.7
PDH1Q12428 INA17YPL099C 549 nt4.45□□□□□ -1.7
PDH1Q12428 snR17bsnR17b 332 nt4.45□□□□□ -1.7
PDH1Q12428 RTC5YOR118W 1704 nt4.45□□□□□ -1.7
PDH1Q12428 RRB1YMR131C 1536 nt4.45□□□□□ -1.7
PDH1Q12428 ALE1YOR175C 1860 nt4.45□□□□□ -1.7
PDH1Q12428 PTR3YFR029W 2037 nt4.45□□□□□ -1.7
PDH1Q12428 YJL206CYJL206C 2277 nt4.44□□□□□ -1.7
PDH1Q12428 RCM1YNL022C 1473 nt4.44□□□□□ -1.7
PDH1Q12428 RVB1YDR190C 1392 nt4.44□□□□□ -1.7
PDH1Q12428 BUD30YDL151C 582 nt4.44□□□□□ -1.7
PDH1Q12428 tR(UCU)Q1tR(UCU)Q1 73 nt4.44□□□□□ -1.7
PDH1Q12428 HRT3YLR097C 1035 nt4.44□□□□□ -1.7
PDH1Q12428 YOL038C-AYOL038C-A 96 nt4.44□□□□□ -1.7
PDH1Q12428 CDC28YBR160W 897 nt4.44□□□□□ -1.7
PDH1Q12428 YER077CYER077C 2067 nt4.44□□□□□ -1.7
PDH1Q12428 GSM1YJL103C 1857 nt4.43□□□□□ -1.7
PDH1Q12428 CDC4YFL009W 2340 nt4.43□□□□□ -1.7
PDH1Q12428 PSY3YLR376C 729 nt4.43□□□□□ -1.7
PDH1Q12428 YOL166CYOL166C 339 nt4.43□□□□□ -1.7
PDH1Q12428 MAK3YPR051W 531 nt4.43□□□□□ -1.7
PDH1Q12428 ALR2YFL050C 2577 nt4.43□□□□□ -1.7
PDH1Q12428 MDM34YGL219C 1380 nt4.42□□□□□ -1.7
PDH1Q12428 RCK2YLR248W 1833 nt4.42□□□□□ -1.7
PDH1Q12428 AIM7YDR063W 450 nt4.42□□□□□ -1.7
PDH1Q12428 YEL067CYEL067C 588 nt4.42□□□□□ -1.7
PDH1Q12428 SUP56tL(CAA)A 82 nt4.42□□□□□ -1.7
PDH1Q12428 SUP53tL(CAA)C 82 nt4.42□□□□□ -1.7
PDH1Q12428 tL(CAA)DtL(CAA)D 82 nt4.42□□□□□ -1.7
PDH1Q12428 tL(CAA)G1tL(CAA)G1 82 nt4.42□□□□□ -1.7
PDH1Q12428 SUP54tL(CAA)G2 82 nt4.42□□□□□ -1.7
PDH1Q12428 tL(CAA)G3tL(CAA)G3 82 nt4.42□□□□□ -1.7
PDH1Q12428 tL(CAA)KtL(CAA)K 82 nt4.42□□□□□ -1.7
PDH1Q12428 tL(CAA)LtL(CAA)L 82 nt4.42□□□□□ -1.7
PDH1Q12428 tL(CAA)MtL(CAA)M 82 nt4.42□□□□□ -1.7
PDH1Q12428 tL(CAA)NtL(CAA)N 82 nt4.42□□□□□ -1.7
PDH1Q12428 YGR204C-AYGR204C-A 114 nt4.42□□□□□ -1.7
PDH1Q12428 CIR1YGR207C 786 nt4.42□□□□□ -1.7
PDH1Q12428 ERD2YBL040C 660 nt4.42□□□□□ -1.7
PDH1Q12428 SPO1YNL012W 1896 nt4.42□□□□□ -1.7
PDH1Q12428 TPS3YMR261C 3165 nt4.42□□□□□ -1.7
PDH1Q12428 KIN2YLR096W 3444 nt4.42□□□□□ -1.7
PDH1Q12428 UBP10YNL186W 2379 nt4.41□□□□□ -1.7
PDH1Q12428 THS1YIL078W 2205 nt4.41□□□□□ -1.7
PDH1Q12428 snR63snR63 255 nt4.41□□□□□ -1.7
PDH1Q12428 RCR2YDR003W 633 nt4.41□□□□□ -1.7
PDH1Q12428 BUD16YEL029C 939 nt4.41□□□□□ -1.7
PDH1Q12428 YER138W-AYER138W-A 105 nt4.41□□□□□ -1.7
PDH1Q12428 YHB1YGR234W 1200 nt4.41□□□□□ -1.7
PDH1Q12428 ECM34YHL043W 513 nt4.41□□□□□ -1.7
PDH1Q12428 YIL089WYIL089W 618 nt4.41□□□□□ -1.7
PDH1Q12428 YKL023WYKL023W 834 nt4.41□□□□□ -1.7
PDH1Q12428 SFK1YKL051W 1062 nt4.41□□□□□ -1.7
PDH1Q12428 MMM1YLL006W 1281 nt4.41□□□□□ -1.7
PDH1Q12428 YLL047WYLL047W 384 nt4.41□□□□□ -1.7
PDH1Q12428 SPC3YLR066W 555 nt4.41□□□□□ -1.7
PDH1Q12428 IBD2YNL164C 1056 nt4.41□□□□□ -1.7
PDH1Q12428 YBL107W-AYBL107W-A 105 nt4.41□□□□□ -1.7
PDH1Q12428 VPS68YOL129W 555 nt4.41□□□□□ -1.7
PDH1Q12428 YPR174CYPR174C 666 nt4.41□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms