Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
UPK1BO75841 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1BO75841 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1BO75841 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPK1BO75841 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.34■□□□□ 0.69
UPK1BO75841 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
UPK1BO75841 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
UPK1BO75841 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.34■□□□□ 0.69
UPK1BO75841 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPK1BO75841 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPK1BO75841 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
UPK1BO75841 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UPK1BO75841 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.33■□□□□ 0.69
UPK1BO75841 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPK1BO75841 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPK1BO75841 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.33■□□□□ 0.69
UPK1BO75841 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.33■□□□□ 0.69
UPK1BO75841 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPK1BO75841 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1BO75841 AC008813.1-201ENST00000536597 885 ntBASIC19.33■□□□□ 0.68
UPK1BO75841 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1BO75841 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.33■□□□□ 0.68
UPK1BO75841 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1BO75841 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
UPK1BO75841 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1BO75841 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1BO75841 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPK1BO75841 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1BO75841 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1BO75841 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UPK1BO75841 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1BO75841 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1BO75841 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1BO75841 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 AC244015.2-201ENST00000616358 1861 ntBASIC19.32■□□□□ 0.68
UPK1BO75841 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1BO75841 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPK1BO75841 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UPK1BO75841 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1BO75841 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1BO75841 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1BO75841 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1BO75841 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.31■□□□□ 0.68
UPK1BO75841 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.31■□□□□ 0.68
UPK1BO75841 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1BO75841 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1BO75841 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.31■□□□□ 0.68
UPK1BO75841 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.31■□□□□ 0.68
UPK1BO75841 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPK1BO75841 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.3■□□□□ 0.68
UPK1BO75841 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 AC097358.2-201ENST00000607541 1159 ntBASIC19.3■□□□□ 0.68
UPK1BO75841 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UPK1BO75841 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.3■□□□□ 0.68
UPK1BO75841 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPK1BO75841 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.3■□□□□ 0.68
UPK1BO75841 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.29■□□□□ 0.68
UPK1BO75841 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 AC087742.1-201ENST00000575880 1738 ntBASIC19.29■□□□□ 0.68
UPK1BO75841 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.29■□□□□ 0.68
UPK1BO75841 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 DUX4L28-201ENST00000623687 678 ntBASIC19.29■□□□□ 0.68
UPK1BO75841 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPK1BO75841 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UPK1BO75841 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.28■□□□□ 0.68
UPK1BO75841 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPK1BO75841 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.28■□□□□ 0.68
UPK1BO75841 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPK1BO75841 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.28■□□□□ 0.68
UPK1BO75841 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.28■□□□□ 0.68
UPK1BO75841 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPK1BO75841 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms