Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NDUFA1O15239 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.12■□□□□ 0.01
NDUFA1O15239 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
NDUFA1O15239 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NDUFA1O15239 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
NDUFA1O15239 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFA1O15239 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.11■□□□□ 0.01
NDUFA1O15239 AC139795.1-202ENST00000500444 432 ntBASIC15.11■□□□□ 0.01
NDUFA1O15239 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFA1O15239 AC011551.1-201ENST00000614101 683 ntBASIC15.11■□□□□ 0.01
NDUFA1O15239 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFA1O15239 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NDUFA1O15239 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.11■□□□□ 0.01
NDUFA1O15239 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NDUFA1O15239 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFA1O15239 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NDUFA1O15239 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFA1O15239 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NDUFA1O15239 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.1■□□□□ 0.01
NDUFA1O15239 LONRF2P2-201ENST00000439212 571 ntBASIC15.1■□□□□ 0.01
NDUFA1O15239 HSD17B1P1-201ENST00000590052 955 ntBASIC15.1■□□□□ 0.01
NDUFA1O15239 AC129492.7-201ENST00000622992 756 ntBASIC15.1■□□□□ 0.01
NDUFA1O15239 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NDUFA1O15239 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NDUFA1O15239 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.09■□□□□ 0.01
NDUFA1O15239 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NDUFA1O15239 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFA1O15239 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.09■□□□□ 0.01
NDUFA1O15239 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NDUFA1O15239 FBXW4P1-201ENST00000426721 2239 ntBASIC15.09■□□□□ 0.01
NDUFA1O15239 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.09■□□□□ 0.01
NDUFA1O15239 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.08■□□□□ 0.01
NDUFA1O15239 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NDUFA1O15239 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NDUFA1O15239 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NDUFA1O15239 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NDUFA1O15239 AC022616.5-201ENST00000518796 181 ntBASIC15.08■□□□□ 0
NDUFA1O15239 U85056.1-201ENST00000616429 682 ntBASIC15.08■□□□□ 0
NDUFA1O15239 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.08■□□□□ 0
NDUFA1O15239 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NDUFA1O15239 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDUFA1O15239 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
NDUFA1O15239 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.08■□□□□ 0
NDUFA1O15239 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFA1O15239 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NDUFA1O15239 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFA1O15239 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.07■□□□□ 0
NDUFA1O15239 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFA1O15239 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFA1O15239 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFA1O15239 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.07■□□□□ 0
NDUFA1O15239 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFA1O15239 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
NDUFA1O15239 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFA1O15239 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
NDUFA1O15239 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.06■□□□□ 0
NDUFA1O15239 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NDUFA1O15239 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NDUFA1O15239 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.06■□□□□ 0
NDUFA1O15239 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.06■□□□□ 0
NDUFA1O15239 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms