Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 C1orf229-201ENST00000623686 2258 ntBASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.59■□□□□ 0.41
TRBV9A0A0B4J1U6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV9A0A0B4J1U6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV9A0A0B4J1U6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV9A0A0B4J1U6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV9A0A0B4J1U6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 KRT16P3-201ENST00000439127 1283 ntBASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 LINC00526-201ENST00000581067 1875 ntBASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV9A0A0B4J1U6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV9A0A0B4J1U6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV9A0A0B4J1U6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 AC079630.1-202ENST00000618127 1840 ntBASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 DUSP8P3-201ENST00000399571 1760 ntBASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV9A0A0B4J1U6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV9A0A0B4J1U6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV9A0A0B4J1U6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV9A0A0B4J1U6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV9A0A0B4J1U6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV9A0A0B4J1U6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV9A0A0B4J1U6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV9A0A0B4J1U6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms