Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RNF6Q9Y252 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF6Q9Y252 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF6Q9Y252 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RNF6Q9Y252 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF6Q9Y252 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF6Q9Y252 MIR4466-201ENST00000606121 54 ntBASIC20.83■□□□□ 0.93
RNF6Q9Y252 AC110285.6-201ENST00000617652 491 ntBASIC20.83■□□□□ 0.93
RNF6Q9Y252 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF6Q9Y252 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.83■□□□□ 0.92
RNF6Q9Y252 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF6Q9Y252 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF6Q9Y252 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
RNF6Q9Y252 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF6Q9Y252 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF6Q9Y252 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF6Q9Y252 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF6Q9Y252 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF6Q9Y252 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF6Q9Y252 AC096631.2-201ENST00000436136 790 ntBASIC20.82■□□□□ 0.92
RNF6Q9Y252 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.82■□□□□ 0.92
RNF6Q9Y252 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF6Q9Y252 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RNF6Q9Y252 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF6Q9Y252 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF6Q9Y252 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF6Q9Y252 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF6Q9Y252 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF6Q9Y252 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF6Q9Y252 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF6Q9Y252 ECEL1P1-201ENST00000373592 1742 ntBASIC20.8■□□□□ 0.92
RNF6Q9Y252 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF6Q9Y252 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF6Q9Y252 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF6Q9Y252 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF6Q9Y252 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF6Q9Y252 AC127496.7-201ENST00000625110 1798 ntBASIC20.8■□□□□ 0.92
RNF6Q9Y252 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF6Q9Y252 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF6Q9Y252 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF6Q9Y252 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF6Q9Y252 AL512631.2-201ENST00000604634 923 ntBASIC20.79■□□□□ 0.92
RNF6Q9Y252 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF6Q9Y252 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF6Q9Y252 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF6Q9Y252 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF6Q9Y252 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF6Q9Y252 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF6Q9Y252 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF6Q9Y252 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF6Q9Y252 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF6Q9Y252 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF6Q9Y252 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RNF6Q9Y252 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF6Q9Y252 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF6Q9Y252 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF6Q9Y252 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF6Q9Y252 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF6Q9Y252 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF6Q9Y252 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF6Q9Y252 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF6Q9Y252 AC137767.1-201ENST00000602918 1920 ntBASIC20.77■□□□□ 0.92
RNF6Q9Y252 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.77■□□□□ 0.92
RNF6Q9Y252 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RNF6Q9Y252 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF6Q9Y252 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.77■□□□□ 0.91
RNF6Q9Y252 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF6Q9Y252 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF6Q9Y252 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF6Q9Y252 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF6Q9Y252 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF6Q9Y252 AC005837.3-201ENST00000612163 286 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms