Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.09■□□□□ 0.97
NANOGQ9H9S0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NANOGQ9H9S0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NANOGQ9H9S0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NANOGQ9H9S0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NANOGQ9H9S0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NANOGQ9H9S0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NANOGQ9H9S0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NANOGQ9H9S0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
NANOGQ9H9S0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NANOGQ9H9S0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 AL137060.1-201ENST00000618151 2648 ntBASIC21.07■□□□□ 0.96
NANOGQ9H9S0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 DUX4L18-201ENST00000553347 1267 ntBASIC21.07■□□□□ 0.96
NANOGQ9H9S0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NANOGQ9H9S0 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 KRT18P24-201ENST00000344739 1156 ntBASIC21.06■□□□□ 0.96
NANOGQ9H9S0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 MIR4281-201ENST00000580852 62 ntBASIC21.06■□□□□ 0.96
NANOGQ9H9S0 AC087742.1-201ENST00000575880 1738 ntBASIC21.06■□□□□ 0.96
NANOGQ9H9S0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NANOGQ9H9S0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NANOGQ9H9S0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NANOGQ9H9S0 SLC25A24-204ENST00000569674 2357 ntBASIC21.03■□□□□ 0.96
NANOGQ9H9S0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NANOGQ9H9S0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NANOGQ9H9S0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NANOGQ9H9S0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NANOGQ9H9S0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NANOGQ9H9S0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NANOGQ9H9S0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NANOGQ9H9S0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NANOGQ9H9S0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NANOGQ9H9S0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NANOGQ9H9S0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.02■□□□□ 0.96
NANOGQ9H9S0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NANOGQ9H9S0 THA1P-201ENST00000590384 1145 ntBASIC21.02■□□□□ 0.96
NANOGQ9H9S0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
NANOGQ9H9S0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.02■□□□□ 0.95
NANOGQ9H9S0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 FBXW4P1-201ENST00000426721 2239 ntBASIC21.01■□□□□ 0.95
NANOGQ9H9S0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms