Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF407Q9C0G0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF407Q9C0G0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZNF407Q9C0G0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF407Q9C0G0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZNF407Q9C0G0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF407Q9C0G0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 LINC01529-204ENST00000636474 1715 ntBASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 IGHV3-19-201ENST00000521488 291 ntBASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 AL031602.1-201ENST00000633169 911 ntBASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF407Q9C0G0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 AC027612.3-201ENST00000413684 1047 ntBASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF407Q9C0G0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF407Q9C0G0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF407Q9C0G0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF407Q9C0G0 AL358852.1-201ENST00000623174 1268 ntBASIC20.02■□□□□ 0.8
ZNF407Q9C0G0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF407Q9C0G0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF407Q9C0G0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ZNF407Q9C0G0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
ZNF407Q9C0G0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF407Q9C0G0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF407Q9C0G0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.02■□□□□ 0.79
ZNF407Q9C0G0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.02■□□□□ 0.79
ZNF407Q9C0G0 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.02■□□□□ 0.79
ZNF407Q9C0G0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4L2-201ENST00000561772 1275 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 AC092666.2-201ENST00000613287 246 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4L6-201ENST00000626483 1275 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4L1-201ENST00000627662 1275 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4L8-201ENST00000629013 1275 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4L3-201ENST00000630187 1275 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4L7-201ENST00000630678 1275 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 DUX4L5-201ENST00000630834 1275 ntBASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF407Q9C0G0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF407Q9C0G0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF407Q9C0G0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
ZNF407Q9C0G0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZNF407Q9C0G0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20■□□□□ 0.79
ZNF407Q9C0G0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF407Q9C0G0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF407Q9C0G0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF407Q9C0G0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF407Q9C0G0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF407Q9C0G0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF407Q9C0G0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF407Q9C0G0 DUX4L4-201ENST00000566884 1269 ntBASIC19.99■□□□□ 0.79
ZNF407Q9C0G0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF407Q9C0G0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF407Q9C0G0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms