Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC9CQ8N5M4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC9CQ8N5M4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC9CQ8N5M4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC9CQ8N5M4 AL117332.1-201ENST00000622628 974 ntBASIC17.52■□□□□ 0.4
TTC9CQ8N5M4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TTC9CQ8N5M4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC9CQ8N5M4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TTC9CQ8N5M4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TTC9CQ8N5M4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 AC133561.1-201ENST00000568600 2415 ntBASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TTC9CQ8N5M4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 MIR3621-201ENST00000580529 85 ntBASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC9CQ8N5M4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 AC009086.3-201ENST00000623486 1008 ntBASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TTC9CQ8N5M4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 AL356441.2-201ENST00000443009 864 ntBASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC9CQ8N5M4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 AC241377.3-202ENST00000626088 1088 ntBASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 AC241585.3-202ENST00000628937 1088 ntBASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 AC245100.8-202ENST00000629247 1058 ntBASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC9CQ8N5M4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms