Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.28■□□□□ 0.68
SNAI3Q3KNW1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 C17orf82-201ENST00000623772 1530 ntBASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNAI3Q3KNW1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.27■□□□□ 0.67
SNAI3Q3KNW1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNAI3Q3KNW1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNAI3Q3KNW1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SNAI3Q3KNW1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 DUX4L4-201ENST00000566884 1269 ntBASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 AL117328.2-201ENST00000624617 1940 ntBASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNAI3Q3KNW1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.24■□□□□ 0.67
SNAI3Q3KNW1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 AL117332.1-201ENST00000622628 974 ntBASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNAI3Q3KNW1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNAI3Q3KNW1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 GUSBP5-202ENST00000510805 1989 ntBASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNAI3Q3KNW1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms