Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 SNF8YPL002C 702 nt5.93□□□□□ -1.46
MSH3P25336 YPR195CYPR195C 330 nt5.93□□□□□ -1.46
MSH3P25336 GEP3YOR205C 1671 nt5.93□□□□□ -1.46
MSH3P25336 ZRC1YMR243C 1329 nt5.93□□□□□ -1.46
MSH3P25336 FHL1YPR104C 2811 nt5.93□□□□□ -1.46
MSH3P25336 HSP42YDR171W 1128 nt5.92□□□□□ -1.46
MSH3P25336 MF(ALPHA)2YGL089C 363 nt5.92□□□□□ -1.46
MSH3P25336 RPR2YIR015W 435 nt5.92□□□□□ -1.46
MSH3P25336 MRPL49YJL096W 486 nt5.92□□□□□ -1.46
MSH3P25336 SYN8YAL014C 768 nt5.92□□□□□ -1.46
MSH3P25336 YJR085CYJR085C 318 nt5.92□□□□□ -1.46
MSH3P25336 YBL096CYBL096C 309 nt5.92□□□□□ -1.46
MSH3P25336 AIM39YOL053W 1188 nt5.92□□□□□ -1.46
MSH3P25336 TYE7YOR344C 876 nt5.92□□□□□ -1.46
MSH3P25336 CCL1YPR025C 1182 nt5.92□□□□□ -1.46
MSH3P25336 YBR116CYBR116C 528 nt5.92□□□□□ -1.46
MSH3P25336 ICS2YBR157C 768 nt5.92□□□□□ -1.46
MSH3P25336 SAG1YJR004C 1953 nt5.92□□□□□ -1.46
MSH3P25336 EKI1YDR147W 1605 nt5.92□□□□□ -1.46
MSH3P25336 DAL81YIR023W 2913 nt5.92□□□□□ -1.46
MSH3P25336 YDR056CYDR056C 618 nt5.91□□□□□ -1.46
MSH3P25336 CTH1YDR151C 978 nt5.91□□□□□ -1.46
MSH3P25336 HTB1YDR224C 396 nt5.91□□□□□ -1.46
MSH3P25336 YFR035CYFR035C 345 nt5.91□□□□□ -1.46
MSH3P25336 YHR214C-DYHR214C-D 294 nt5.91□□□□□ -1.46
MSH3P25336 YAR069CYAR069C 294 nt5.91□□□□□ -1.46
MSH3P25336 ATG34YOL083W 1239 nt5.91□□□□□ -1.46
MSH3P25336 RPS9BYBR189W 588 nt5.91□□□□□ -1.46
MSH3P25336 snR44snR44 211 nt5.91□□□□□ -1.46
MSH3P25336 YBR287WYBR287W 1284 nt5.91□□□□□ -1.46
MSH3P25336 KTR6YPL053C 1341 nt5.91□□□□□ -1.46
MSH3P25336 SAS10YDL153C 1833 nt5.9□□□□□ -1.46
MSH3P25336 VAN1YML115C 1608 nt5.9□□□□□ -1.46
MSH3P25336 IWR1YDL115C 1062 nt5.9□□□□□ -1.46
MSH3P25336 RPL22BYFL034C-A 369 nt5.9□□□□□ -1.46
MSH3P25336 HSX1tR(CCU)J 72 nt5.9□□□□□ -1.46
MSH3P25336 CAB2YIL083C 1098 nt5.9□□□□□ -1.46
MSH3P25336 PAU17YLL025W 375 nt5.9□□□□□ -1.46
MSH3P25336 YPT6YLR262C 648 nt5.9□□□□□ -1.46
MSH3P25336 SPP381YBR152W 876 nt5.9□□□□□ -1.46
MSH3P25336 MGA1YGR249W 1371 nt5.9□□□□□ -1.47
MSH3P25336 YTM1YOR272W 1383 nt5.9□□□□□ -1.47
MSH3P25336 TOS4YLR183C 1470 nt5.9□□□□□ -1.47
MSH3P25336 YHR045WYHR045W 1683 nt5.89□□□□□ -1.47
MSH3P25336 YDL034WYDL034W 345 nt5.89□□□□□ -1.47
MSH3P25336 RDI1YDL135C 609 nt5.89□□□□□ -1.47
MSH3P25336 YDL172CYDL172C 480 nt5.89□□□□□ -1.47
MSH3P25336 COQ4YDR204W 1008 nt5.89□□□□□ -1.47
MSH3P25336 PEX21YGR239C 867 nt5.89□□□□□ -1.47
MSH3P25336 YKR041WYKR041W 753 nt5.89□□□□□ -1.47
MSH3P25336 HMX1YLR205C 954 nt5.89□□□□□ -1.47
MSH3P25336 GPI12YMR281W 915 nt5.89□□□□□ -1.47
MSH3P25336 MRPL22YNL177C 930 nt5.89□□□□□ -1.47
MSH3P25336 YNL320WYNL320W 855 nt5.89□□□□□ -1.47
MSH3P25336 YDR444WYDR444W 2064 nt5.89□□□□□ -1.47
MSH3P25336 CTS2YDR371W 1536 nt5.89□□□□□ -1.47
MSH3P25336 APE1YKL103C 1545 nt5.89□□□□□ -1.47
MSH3P25336 CBP1YJL209W 1965 nt5.88□□□□□ -1.47
MSH3P25336 YFR045WYFR045W 930 nt5.88□□□□□ -1.47
MSH3P25336 PRP21YJL203W 843 nt5.88□□□□□ -1.47
MSH3P25336 SDS22YKL193C 1017 nt5.88□□□□□ -1.47
MSH3P25336 COS9YKL219W 1224 nt5.88□□□□□ -1.47
MSH3P25336 TMA16YOR252W 537 nt5.88□□□□□ -1.47
MSH3P25336 FBP26YJL155C 1359 nt5.88□□□□□ -1.47
MSH3P25336 TYR1YBR166C 1359 nt5.88□□□□□ -1.47
MSH3P25336 TRM13YOL125W 1431 nt5.88□□□□□ -1.47
MSH3P25336 SYG1YIL047C 2709 nt5.88□□□□□ -1.47
MSH3P25336 STE20YHL007C 2820 nt5.87□□□□□ -1.47
MSH3P25336 SRB7YDR308C 423 nt5.87□□□□□ -1.47
MSH3P25336 YGR022CYGR022C 330 nt5.87□□□□□ -1.47
MSH3P25336 SYF2YGR129W 648 nt5.87□□□□□ -1.47
MSH3P25336 CBP4YGR174C 513 nt5.87□□□□□ -1.47
MSH3P25336 COX6YHR051W 447 nt5.87□□□□□ -1.47
MSH3P25336 CKA1YIL035C 1119 nt5.87□□□□□ -1.47
MSH3P25336 YAL069WYAL069W 315 nt5.87□□□□□ -1.47
MSH3P25336 TEM1YML064C 738 nt5.87□□□□□ -1.47
MSH3P25336 QDR1YIL120W 1692 nt5.87□□□□□ -1.47
MSH3P25336 BRF1YGR246C 1791 nt5.87□□□□□ -1.47
MSH3P25336 SPO1YNL012W 1896 nt5.86□□□□□ -1.47
MSH3P25336 ADE13YLR359W 1449 nt5.86□□□□□ -1.47
MSH3P25336 YCR097W-AYCR097W-A 267 nt5.86□□□□□ -1.47
MSH3P25336 NRG1YDR043C 696 nt5.86□□□□□ -1.47
MSH3P25336 UBC1YDR177W 648 nt5.86□□□□□ -1.47
MSH3P25336 MRP17YKL003C 396 nt5.86□□□□□ -1.47
MSH3P25336 TFS1YLR178C 660 nt5.86□□□□□ -1.47
MSH3P25336 ATG38YLR211C 681 nt5.86□□□□□ -1.47
MSH3P25336 SRT1YMR101C 1032 nt5.86□□□□□ -1.47
MSH3P25336 RRT1YBL048W 312 nt5.86□□□□□ -1.47
MSH3P25336 RPS19BYNL302C 435 nt5.86□□□□□ -1.47
MSH3P25336 YNR075C-AYNR075C-A 93 nt5.86□□□□□ -1.47
MSH3P25336 BUB3YOR026W 1026 nt5.86□□□□□ -1.47
MSH3P25336 GRE1YPL223C 507 nt5.86□□□□□ -1.47
MSH3P25336 YBR230W-AYBR230W-A 201 nt5.86□□□□□ -1.47
MSH3P25336 FOL1YNL256W 2475 nt5.86□□□□□ -1.47
MSH3P25336 UBP7YIL156W 3216 nt5.86□□□□□ -1.47
MSH3P25336 BDP1YNL039W 1785 nt5.85□□□□□ -1.47
MSH3P25336 YFL040WYFL040W 1623 nt5.85□□□□□ -1.47
MSH3P25336 ERT1YBR239C 1590 nt5.85□□□□□ -1.47
MSH3P25336 ASA1YPR085C 1332 nt5.85□□□□□ -1.47
MSH3P25336 YFL012W-AYFL012W-A 375 nt5.85□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms