Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 FP325331.1-202ENST00000623531 1380 ntBASIC19.35■□□□□ 0.69
CCL2P13500 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL2P13500 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.35■□□□□ 0.69
CCL2P13500 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCL2P13500 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL2P13500 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL2P13500 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.35■□□□□ 0.69
CCL2P13500 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL2P13500 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL2P13500 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCL2P13500 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.34■□□□□ 0.69
CCL2P13500 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL2P13500 AC241377.3-202ENST00000626088 1088 ntBASIC19.34■□□□□ 0.69
CCL2P13500 AC241585.3-202ENST00000628937 1088 ntBASIC19.34■□□□□ 0.69
CCL2P13500 AC245100.8-202ENST00000629247 1058 ntBASIC19.34■□□□□ 0.69
CCL2P13500 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL2P13500 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL2P13500 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL2P13500 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCL2P13500 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL2P13500 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL2P13500 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL2P13500 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL2P13500 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL2P13500 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.33■□□□□ 0.69
CCL2P13500 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.33■□□□□ 0.69
CCL2P13500 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CCL2P13500 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL2P13500 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
CCL2P13500 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.33■□□□□ 0.68
CCL2P13500 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL2P13500 DUX4L4-201ENST00000566884 1269 ntBASIC19.33■□□□□ 0.68
CCL2P13500 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL2P13500 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL2P13500 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL2P13500 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCL2P13500 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL2P13500 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL2P13500 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CCL2P13500 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCL2P13500 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CCL2P13500 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL2P13500 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL2P13500 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCL2P13500 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL2P13500 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL2P13500 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCL2P13500 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL2P13500 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL2P13500 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.31■□□□□ 0.68
CCL2P13500 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.31■□□□□ 0.68
CCL2P13500 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL2P13500 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.31■□□□□ 0.68
CCL2P13500 pRNA.6-201ENST00000610482 90 ntBASIC19.31■□□□□ 0.68
CCL2P13500 pRNA.5-201ENST00000612139 90 ntBASIC19.31■□□□□ 0.68
CCL2P13500 pRNA.11-201ENST00000618423 90 ntBASIC19.31■□□□□ 0.68
CCL2P13500 pRNA.13-201ENST00000619112 90 ntBASIC19.31■□□□□ 0.68
CCL2P13500 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCL2P13500 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL2P13500 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL2P13500 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.3■□□□□ 0.68
CCL2P13500 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL2P13500 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CCL2P13500 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL2P13500 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL2P13500 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL2P13500 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL2P13500 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCL2P13500 SYT6-210ENST00000641643 1587 ntBASIC19.3■□□□□ 0.68
CCL2P13500 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL2P13500 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.3■□□□□ 0.68
CCL2P13500 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL2P13500 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL2P13500 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CCL2P13500 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCL2P13500 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL2P13500 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL2P13500 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CCL2P13500 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.29■□□□□ 0.68
CCL2P13500 AC096631.2-201ENST00000436136 790 ntBASIC19.29■□□□□ 0.68
CCL2P13500 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.29■□□□□ 0.68
CCL2P13500 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.29■□□□□ 0.68
CCL2P13500 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.29■□□□□ 0.68
CCL2P13500 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL2P13500 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL2P13500 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms