Protein–RNA interactions for Protein: A6NNE9

MARCH11, E3 ubiquitin-protein ligase MARCH11, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH11A6NNE9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MARCH11A6NNE9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MARCH11A6NNE9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MARCH11A6NNE9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 MIR4508-201ENST00000584178 70 ntBASIC18.06■□□□□ 0.48
MARCH11A6NNE9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MARCH11A6NNE9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MARCH11A6NNE9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MARCH11A6NNE9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 PKD1P6-201ENST00000343738 4769 ntBASIC18.03■□□□□ 0.48
MARCH11A6NNE9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 SNX5-217ENST00000606557 1087 ntBASIC18.03■□□□□ 0.48
MARCH11A6NNE9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MARCH11A6NNE9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.02■□□□□ 0.48
MARCH11A6NNE9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MARCH11A6NNE9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MARCH11A6NNE9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
MARCH11A6NNE9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MARCH11A6NNE9 AC144652.1-201ENST00000609974 1624 ntBASIC18.01■□□□□ 0.47
MARCH11A6NNE9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.01■□□□□ 0.47
MARCH11A6NNE9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MARCH11A6NNE9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MARCH11A6NNE9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms