Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC194A0A1B0GVG4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 C9orf163-202ENST00000624034 2573 ntBASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.42■■□□□ 1.66
CCDC194A0A1B0GVG4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.41■■□□□ 1.66
CCDC194A0A1B0GVG4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC194A0A1B0GVG4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC194A0A1B0GVG4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.41■■□□□ 1.66
CCDC194A0A1B0GVG4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC194A0A1B0GVG4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CCDC194A0A1B0GVG4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CCDC194A0A1B0GVG4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC194A0A1B0GVG4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.39■■□□□ 1.66
CCDC194A0A1B0GVG4 pRNA.6-201ENST00000610482 90 ntBASIC25.39■■□□□ 1.66
CCDC194A0A1B0GVG4 pRNA.5-201ENST00000612139 90 ntBASIC25.39■■□□□ 1.66
CCDC194A0A1B0GVG4 pRNA.11-201ENST00000618423 90 ntBASIC25.39■■□□□ 1.66
CCDC194A0A1B0GVG4 pRNA.13-201ENST00000619112 90 ntBASIC25.39■■□□□ 1.66
CCDC194A0A1B0GVG4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
CCDC194A0A1B0GVG4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.39■■□□□ 1.65
CCDC194A0A1B0GVG4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.39■■□□□ 1.65
CCDC194A0A1B0GVG4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.39■■□□□ 1.65
CCDC194A0A1B0GVG4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.39■■□□□ 1.65
CCDC194A0A1B0GVG4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC194A0A1B0GVG4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.38■■□□□ 1.65
CCDC194A0A1B0GVG4 AL499627.2-201ENST00000606283 725 ntBASIC25.38■■□□□ 1.65
CCDC194A0A1B0GVG4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC194A0A1B0GVG4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.38■■□□□ 1.65
CCDC194A0A1B0GVG4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
CCDC194A0A1B0GVG4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCDC194A0A1B0GVG4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC194A0A1B0GVG4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC194A0A1B0GVG4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC194A0A1B0GVG4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC194A0A1B0GVG4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.37■■□□□ 1.65
CCDC194A0A1B0GVG4 DUX4L19-201ENST00000557448 1267 ntBASIC25.37■■□□□ 1.65
CCDC194A0A1B0GVG4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CCDC194A0A1B0GVG4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 SYT6-210ENST00000641643 1587 ntBASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CCDC194A0A1B0GVG4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 MIR3181-201ENST00000578512 73 ntBASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC194A0A1B0GVG4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC194A0A1B0GVG4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC194A0A1B0GVG4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms