Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 GUSBP5-201ENST00000418136 578 ntBASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 TSPY9P-201ENST00000440215 945 ntBASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 TSPY11P-201ENST00000442607 1045 ntBASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRBV9A0A0B4J1U6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV9A0A0B4J1U6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV9A0A0B4J1U6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV9A0A0B4J1U6 AC092068.2-201ENST00000590491 1708 ntBASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 ANOS2P-203ENST00000472227 1816 ntBASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV9A0A0B4J1U6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV9A0A0B4J1U6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV9A0A0B4J1U6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 MIR6724-1-201ENST00000616420 92 ntBASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 MIR6724-2-201ENST00000616483 92 ntBASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 MIR6724-4-201ENST00000617390 92 ntBASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 MIR6724-3-201ENST00000622482 92 ntBASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TRBV9A0A0B4J1U6 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV9A0A0B4J1U6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms