Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.25■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.25■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.25■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 AC096631.2-201ENST00000436136 790 ntBASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 FP325331.1-202ENST00000623531 1380 ntBASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 pRNA.6-201ENST00000610482 90 ntBASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 pRNA.5-201ENST00000612139 90 ntBASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 pRNA.11-201ENST00000618423 90 ntBASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 pRNA.13-201ENST00000619112 90 ntBASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 SYT6-210ENST00000641643 1587 ntBASIC23.23■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.22■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 UNC93B3-201ENST00000308076 687 ntBASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 DUX4L4-201ENST00000566884 1269 ntBASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 AC092171.4-201ENST00000609130 632 ntBASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SYNJ2BP-COX16A0A087WUM0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 DUSP8P3-201ENST00000399571 1760 ntBASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 SERBP1P1-201ENST00000396021 1160 ntBASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.18■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms