Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 GUSBP5-202ENST00000510805 1989 ntBASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 BX664725.1-201ENST00000438252 379 ntBASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 LINC00526-201ENST00000581067 1875 ntBASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RHBDD3Q9Y3P4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 AC021242.3-201ENST00000607598 1377 ntBASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.46■□□□□ 0.71
RHBDD3Q9Y3P4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDD3Q9Y3P4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDD3Q9Y3P4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDD3Q9Y3P4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.42■□□□□ 0.7
RHBDD3Q9Y3P4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms