Protein–RNA interactions for Protein: Q9UM44

HHLA2, HERV-H LTR-associating protein 2, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA2Q9UM44 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HHLA2Q9UM44 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HHLA2Q9UM44 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.47■□□□□ 0.71
HHLA2Q9UM44 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HHLA2Q9UM44 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HHLA2Q9UM44 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 AC010980.1-201ENST00000587192 1142 ntBASIC19.46■□□□□ 0.71
HHLA2Q9UM44 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HHLA2Q9UM44 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 TSPY13P-201ENST00000338964 914 ntBASIC19.45■□□□□ 0.7
HHLA2Q9UM44 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.45■□□□□ 0.7
HHLA2Q9UM44 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HHLA2Q9UM44 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.43■□□□□ 0.7
HHLA2Q9UM44 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HHLA2Q9UM44 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 MIR4508-201ENST00000584178 70 ntBASIC19.41■□□□□ 0.7
HHLA2Q9UM44 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.41■□□□□ 0.7
HHLA2Q9UM44 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HHLA2Q9UM44 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HHLA2Q9UM44 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
HHLA2Q9UM44 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HHLA2Q9UM44 AC137767.1-201ENST00000602918 1920 ntBASIC19.4■□□□□ 0.7
HHLA2Q9UM44 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HHLA2Q9UM44 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HHLA2Q9UM44 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms